Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69467 | Soybean | nucleus | 91.7 | 89.84 |
| Bra031715.1-P | Field mustard | nucleus | 30.71 | 36.27 |
| VIT_14s0066g01860.t01 | Wine grape | nucleus | 36.1 | 36.25 |
| CDY34889 | Canola | nucleus | 30.29 | 36.14 |
| AT1G10480.1 | Thale cress | nucleus | 31.54 | 36.02 |
| CDY67406 | Canola | nucleus | 30.71 | 35.92 |
| Bra018438.1-P | Field mustard | nucleus | 30.29 | 35.61 |
| CDY20951 | Canola | nucleus | 30.29 | 35.61 |
| CDY20629 | Canola | nucleus | 30.29 | 35.44 |
| KRH46944 | Soybean | nucleus | 21.16 | 29.65 |
| KRH01734 | Soybean | nucleus | 21.58 | 29.05 |
| Solyc03g113890.1.1 | Tomato | nucleus | 25.31 | 26.52 |
| PGSC0003DMT400062866 | Potato | nucleus | 24.07 | 25.22 |
| KRH68238 | Soybean | nucleus | 16.18 | 23.49 |
| KRH37026 | Soybean | nucleus | 14.11 | 23.45 |
| KRH11994 | Soybean | nucleus | 17.84 | 23.24 |
| KRG96499 | Soybean | nucleus | 17.43 | 21.65 |
| KRG90856 | Soybean | nucleus | 24.07 | 20.64 |
| KRH35924 | Soybean | nucleus | 24.07 | 20.49 |
| KRG95435 | Soybean | nucleus | 19.92 | 18.82 |
| KRH67106 | Soybean | nucleus | 19.92 | 18.53 |
| KRH38054 | Soybean | nucleus | 20.75 | 16.29 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02000061 | EnsemblPlantsGene:GLYMA_01G036600 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | UniProt:I1J5E7 |
| InterPro:IPR013087 | EnsemblPlants:KRH74690 | ProteinID:KRH74690 | ProteinID:KRH74690.1 | PFAM:PF13912 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF252 | SUPFAM:SSF57667 | UniParc:UPI0001E24D1A | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:3860214..3861413
Molecular Weight (calculated)
27316.2 Da
IEP (calculated)
7.595
GRAVY (calculated)
-1.037
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKDIIHLSP TWDGDNGNST EKRLRLFGFE LNPSKDGYAK ESGEGDESVN SSNSVSSGGD KTVQEKPSAK DSDERKFECQ YCYKEFANSQ ALGGHQNAHK
101: KERMKKKRLQ LQSINRYLQH PFQSKHGFAH PSDTPWFYDP STYNNSEFTL SEEPQISFNS NVLDANFSCD QKSSWYSLAS HPSNSQQDTC MFTFSNASNN
201: SPFIFKPCHF PASNQSHKSK ALDLQLGLNL QSNTRSSLRR M
101: KERMKKKRLQ LQSINRYLQH PFQSKHGFAH PSDTPWFYDP STYNNSEFTL SEEPQISFNS NVLDANFSCD QKSSWYSLAS HPSNSQQDTC MFTFSNASNN
201: SPFIFKPCHF PASNQSHKSK ALDLQLGLNL QSNTRSSLRR M
001: MATETSSLKL FGINLLETTS VQNQSSEPRP GSGSGSESRK YECQYCCREF ANSQALGGHQ NAHKKERQLL KRAQMLATRG LPRHHNFHPH TNPLLSAFAP
101: LPHLLSQPHP PPHMMLSPSS SSSKWLYGEH MSSQNAVGYF HGGRGLYGGG MESMAGEVKT HGGSLPEMRR FAGDSDRSSG IKLENGIGLD LHLSLGP
101: LPHLLSQPHP PPHMMLSPSS SSSKWLYGEH MSSQNAVGYF HGGRGLYGGG MESMAGEVKT HGGSLPEMRR FAGDSDRSSG IKLENGIGLD LHLSLGP
Arabidopsis Description
ZFP6Zinc finger protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q39265]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.