Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01734 | Soybean | nucleus | 85.47 | 82.12 |
| PGSC0003DMT400037720 | Potato | nucleus | 45.35 | 36.28 |
| Solyc05g009180.1.1 | Tomato | nucleus | 45.35 | 36.28 |
| Solyc05g009170.1.1 | Tomato | nucleus | 43.6 | 35.38 |
| PGSC0003DMT400037771 | Potato | nucleus | 43.02 | 34.91 |
| KRH68238 | Soybean | nucleus | 26.16 | 27.11 |
| KRG90856 | Soybean | nucleus | 41.28 | 25.27 |
| KRH35924 | Soybean | nucleus | 40.7 | 24.73 |
| KRG96499 | Soybean | nucleus | 26.16 | 23.2 |
| KRH37026 | Soybean | nucleus | 18.02 | 21.38 |
| KRH74690 | Soybean | nucleus | 29.65 | 21.16 |
| KRH11994 | Soybean | nucleus | 21.51 | 20.0 |
| KRH69467 | Soybean | nucleus | 28.49 | 19.92 |
| KRG95435 | Soybean | nucleus | 25.0 | 16.86 |
| KRH67106 | Soybean | nucleus | 24.42 | 16.22 |
| KRH38054 | Soybean | nucleus | 25.0 | 14.01 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02005368 | EnsemblPlantsGene:GLYMA_08G366900 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | UniProt:I1KZM6 |
| InterPro:IPR013087 | EnsemblPlants:KRH46944 | ProteinID:KRH46944 | ProteinID:KRH46944.1 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF243 | SUPFAM:SSF57667 | UniParc:UPI0002337F97 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:47745656..47746762
Molecular Weight (calculated)
18837.2 Da
IEP (calculated)
8.959
GRAVY (calculated)
-0.588
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEIEYHAKS NTNTPPLKLF GININKSPED QTHELASSNS ETFMNSRKYE CQYCCREFAN SQALGGHQNA HKKERQLLKR AQMQAARGFV ASQIHNTIIS
101: SLSPQSQPPL SWLCTPHGGA AFVAPGRLVY AAAADGRARH HHPLPRFGGF NGGDGSGGGR ERVFDLDLHL SL
101: SLSPQSQPPL SWLCTPHGGA AFVAPGRLVY AAAADGRARH HHPLPRFGGF NGGDGSGGGR ERVFDLDLHL SL
001: MATETSSLKL FGINLLETTS VQNQSSEPRP GSGSGSESRK YECQYCCREF ANSQALGGHQ NAHKKERQLL KRAQMLATRG LPRHHNFHPH TNPLLSAFAP
101: LPHLLSQPHP PPHMMLSPSS SSSKWLYGEH MSSQNAVGYF HGGRGLYGGG MESMAGEVKT HGGSLPEMRR FAGDSDRSSG IKLENGIGLD LHLSLGP
101: LPHLLSQPHP PPHMMLSPSS SSSKWLYGEH MSSQNAVGYF HGGRGLYGGG MESMAGEVKT HGGSLPEMRR FAGDSDRSSG IKLENGIGLD LHLSLGP
Arabidopsis Description
ZFP6Zinc finger protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q39265]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.