Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46944 | Soybean | nucleus | 82.12 | 85.47 |
| PGSC0003DMT400037720 | Potato | nucleus | 45.81 | 38.14 |
| Solyc05g009180.1.1 | Tomato | nucleus | 45.81 | 38.14 |
| Solyc05g009170.1.1 | Tomato | nucleus | 43.58 | 36.79 |
| PGSC0003DMT400037771 | Potato | nucleus | 43.02 | 36.32 |
| KRH68238 | Soybean | nucleus | 26.26 | 28.31 |
| KRG90856 | Soybean | nucleus | 41.9 | 26.69 |
| KRH35924 | Soybean | nucleus | 41.34 | 26.15 |
| KRG96499 | Soybean | nucleus | 25.14 | 23.2 |
| KRH37026 | Soybean | nucleus | 18.44 | 22.76 |
| KRH74690 | Soybean | nucleus | 29.05 | 21.58 |
| KRH69467 | Soybean | nucleus | 27.93 | 20.33 |
| KRH11994 | Soybean | nucleus | 20.67 | 20.0 |
| KRG95435 | Soybean | nucleus | 25.14 | 17.65 |
| KRH67106 | Soybean | nucleus | 24.02 | 16.6 |
| KRH38054 | Soybean | nucleus | 25.14 | 14.66 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02011525 | EnsemblPlantsGene:GLYMA_18G295500 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | UniProt:I1N5A8 |
| InterPro:IPR013087 | EnsemblPlants:KRH01734 | ProteinID:KRH01734 | ProteinID:KRH01734.1 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF243 | SUPFAM:SSF57667 | UniParc:UPI00023D8B1A | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:57283068..57284069
Molecular Weight (calculated)
19287.5 Da
IEP (calculated)
8.939
GRAVY (calculated)
-0.609
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEIEYHAKS NTNTQPLKLF GINISKSPED QTHEAGSNSE PFSSRKYECQ YCCREFANSQ ALGGHQNAHK KERQLLKRAQ MQAARGFVSS QIHNTIISSF
101: SPQSQPPLSW LCTPHGGAYH SGAAFVASGR RIYVAAAGAS ITDGHGHRHP LPQFGGFNGG EGSGGGRERG LGLDLHLSL
101: SPQSQPPLSW LCTPHGGAYH SGAAFVASGR RIYVAAAGAS ITDGHGHRHP LPQFGGFNGG EGSGGGRERG LGLDLHLSL
001: MATETSSLKL FGINLLETTS VQNQSSEPRP GSGSGSESRK YECQYCCREF ANSQALGGHQ NAHKKERQLL KRAQMLATRG LPRHHNFHPH TNPLLSAFAP
101: LPHLLSQPHP PPHMMLSPSS SSSKWLYGEH MSSQNAVGYF HGGRGLYGGG MESMAGEVKT HGGSLPEMRR FAGDSDRSSG IKLENGIGLD LHLSLGP
101: LPHLLSQPHP PPHMMLSPSS SSSKWLYGEH MSSQNAVGYF HGGRGLYGGG MESMAGEVKT HGGSLPEMRR FAGDSDRSSG IKLENGIGLD LHLSLGP
Arabidopsis Description
ZFP6Zinc finger protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q39265]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.