Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g00850.t01 | Wine grape | nucleus | 38.33 | 37.25 |
| KRH74690 | Soybean | nucleus | 36.25 | 36.1 |
| KRH69467 | Soybean | nucleus | 35.83 | 34.96 |
| Solyc03g113890.1.1 | Tomato | nucleus | 31.25 | 32.61 |
| PGSC0003DMT400062866 | Potato | nucleus | 30.0 | 31.3 |
| CDY20629 | Canola | nucleus | 26.67 | 31.07 |
| Bra031715.1-P | Field mustard | nucleus | 26.25 | 30.88 |
| CDY34889 | Canola | nucleus | 25.83 | 30.69 |
| CDY67406 | Canola | nucleus | 26.25 | 30.58 |
| AT1G10480.1 | Thale cress | nucleus | 25.83 | 29.38 |
| Bra018438.1-P | Field mustard | nucleus | 25.0 | 29.27 |
| CDY20951 | Canola | nucleus | 25.0 | 29.27 |
| VIT_14s0006g02730.t01 | Wine grape | cytosol, mitochondrion, nucleus | 20.0 | 22.86 |
| VIT_01s0011g03780.t01 | Wine grape | nucleus | 19.17 | 20.81 |
| VIT_05s0077g01390.t01 | Wine grape | nucleus | 17.92 | 20.77 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 16.25 | 16.39 |
Protein Annotations
| EntrezGene:100852925 | wikigene:100852925 | MapMan:15.5.15 | Gene3D:3.30.160.60 | ProteinID:CCB58547 | ProteinID:CCB58547.1 |
| UniProt:F6HV29 | EMBL:FN596252 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | EntrezGene:LOC100852925 | wikigene:LOC100852925 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF252 | SUPFAM:SSF57667 | UniParc:UPI00015C9699 |
| ArrayExpress:VIT_14s0066g01860 | EnsemblPlantsGene:VIT_14s0066g01860 | EnsemblPlants:VIT_14s0066g01860.t01 | unigene:Vvi.18759 | RefSeq:XP_003633811 | RefSeq:XP_003633811.1 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr14:-:28162609..28163648
Molecular Weight (calculated)
27029.0 Da
IEP (calculated)
8.934
GRAVY (calculated)
-0.662
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAALFLQD IAILPEMETG VLEHSLAASN PFSSSFGDEG FYSKALIKGK KLRLFGFDVN PCANDGKRSV ESEEGDESLS SSNTPSPWKE KTLQGKSSTK
101: LLKERRYACQ YCRKEFANSQ ALGGHQNAHK KERVKKKRMQ LEARRASINQ YLQSFQSHPR FTEPSFSIPE YSVCESPNTL NLIHHQTYLS DPHDLDSFGQ
201: QVYVPFQHGD MLGWADGSKC SRAMPGVIKP LPLRISRQRL
101: LLKERRYACQ YCRKEFANSQ ALGGHQNAHK KERVKKKRMQ LEARRASINQ YLQSFQSHPR FTEPSFSIPE YSVCESPNTL NLIHHQTYLS DPHDLDSFGQ
201: QVYVPFQHGD MLGWADGSKC SRAMPGVIKP LPLRISRQRL
001: MSINPTMSRT GESSSGSSSD KTIKLFGFEL ISGSRTPEIT TAESVSSSTN TTSLTVMKRH ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
Arabidopsis Description
ZFP5Zinc finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q39264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.