Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G314600.1 | Wheat | nucleus | 71.33 | 69.82 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 70.97 | 69.23 |
| EES07621 | Sorghum | nucleus | 76.34 | 69.16 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 70.25 | 69.01 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 69.53 | 68.79 |
| Zm00001d018247_P001 | Maize | nucleus | 69.89 | 68.66 |
| Zm00001d052118_P001 | Maize | nucleus | 72.4 | 66.01 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 39.43 | 46.22 |
| PGSC0003DMT400013992 | Potato | nucleus | 35.84 | 43.29 |
| Solyc03g058160.2.1 | Tomato | nucleus | 32.26 | 40.91 |
| GSMUA_Achr8P22740_001 | Banana | nucleus | 36.56 | 40.16 |
| KRG95435 | Soybean | nucleus | 35.84 | 39.22 |
| KRH67106 | Soybean | nucleus | 36.2 | 39.0 |
| Os08t0463500-01 | Rice | nucleus | 41.58 | 38.67 |
| GSMUA_Achr3P07800_001 | Banana | nucleus | 30.47 | 38.64 |
| CDY57240 | Canola | nucleus | 32.97 | 38.49 |
| Bra003317.1-P | Field mustard | nucleus | 31.9 | 37.71 |
| GSMUA_Achr10P... | Banana | nucleus | 36.2 | 37.13 |
| Os09t0445500-01 | Rice | nucleus | 38.71 | 36.49 |
| CDX79901 | Canola | nucleus | 32.62 | 36.4 |
| CDY35394 | Canola | nucleus | 32.26 | 36.29 |
| CDY22545 | Canola | nucleus | 32.62 | 36.26 |
| Solyc10g078970.1.1 | Tomato | nucleus | 26.52 | 36.1 |
| Os03t0216000-01 | Rice | nucleus | 38.35 | 36.03 |
| Bra004660.1-P | Field mustard | nucleus | 32.26 | 36.0 |
| Bra000245.1-P | Field mustard | nucleus | 31.9 | 35.89 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 35.48 | 35.87 |
| CDY06892 | Canola | nucleus | 32.62 | 35.83 |
| Bra016900.1-P | Field mustard | nucleus | 32.62 | 35.83 |
| AT2G41940.1 | Thale cress | nucleus | 32.97 | 35.8 |
| CDY14805 | Canola | nucleus | 32.62 | 35.55 |
| CDY56241 | Canola | nucleus | 28.32 | 35.27 |
| Solyc10g080600.1.1 | Tomato | nucleus | 29.39 | 35.04 |
| CDY04997 | Canola | nucleus | 22.22 | 34.64 |
| Bra028724.1-P | Field mustard | nucleus | 22.58 | 34.62 |
| KRH38054 | Soybean | nucleus | 37.99 | 34.53 |
| PGSC0003DMT400060839 | Potato | nucleus | 29.39 | 34.45 |
| CDY14074 | Canola | nucleus | 22.22 | 34.44 |
| AT5G06650.1 | Thale cress | nucleus | 23.3 | 34.03 |
| PGSC0003DMT400029797 | Potato | nucleus | 31.18 | 33.72 |
| Solyc10g078990.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 27.96 | 33.62 |
| CDX71975 | Canola | nucleus | 29.75 | 32.94 |
| AT3G58070.1 | Thale cress | nucleus | 29.75 | 32.81 |
| Bra007378.1-P | Field mustard | nucleus | 29.39 | 32.41 |
| CDY06054 | Canola | nucleus | 29.39 | 32.41 |
| CDY64571 | Canola | nucleus | 31.18 | 27.62 |
| Os01t0512700-00 | Rice | cytosol, nucleus, plastid | 21.86 | 25.21 |
| Os01t0132766-01 | Rice | nucleus | 19.0 | 19.85 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:4330898 | EMBL:AK058592 | EMBL:AK068762 | ProteinID:BAD17151.1 |
| ProteinID:BAD17369.1 | ProteinID:BAF10197.1 | ProteinID:BAS81164.1 | ProteinID:EAZ24796.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 |
| EnsemblPlantsGene:Os02g0775600 | EnsemblPlants:Os02t0775600-01 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF238 |
| UniProt:Q6YZ50 | SUPFAM:SSF57667 | UniParc:UPI000035AE14 | RefSeq:XP_015623899.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
Zinc finger, C2H2-like domain containing protein. (Os02t0775600-01);Zinc finger, C2H2-like domain containing protein. (Os02t0775600-02)
Coordinates
chr2:-:32750142..32751374
Molecular Weight (calculated)
29422.5 Da
IEP (calculated)
7.635
GRAVY (calculated)
-0.561
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPQDMRSV DSFSQLPFIR PAPPPQQQAR DTIRLFGCEF SNDLQLRPTE AGAGSPDAAN GSTVTSEGSN GGDGGTKNGG AATAAAERKF ECHYCCRNFP
101: TSQALGGHQN AHKRERQHAK RAHLQASLAM HRYMPGHMYG LFNYHHHIGG RFDHHPPPPP PPPPPAHYPM WTSAAPGAFA GPGSMAQPIN GSPVQAGLWS
201: VPPPTENFGS TAGRQGADKL ATTVAGTPAA GEVACKDEMV PMSLLSSSPS LSSCSSTSPE MLGRCELGQK EGVSLDLHL
101: TSQALGGHQN AHKRERQHAK RAHLQASLAM HRYMPGHMYG LFNYHHHIGG RFDHHPPPPP PPPPPAHYPM WTSAAPGAFA GPGSMAQPIN GSPVQAGLWS
201: VPPPTENFGS TAGRQGADKL ATTVAGTPAA GEVACKDEMV PMSLLSSSPS LSSCSSTSPE MLGRCELGQK EGVSLDLHL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.