Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13973 | Sorghum | nucleus | 64.67 | 59.69 |
| Zm00001d050111_P001 | Maize | nucleus | 61.0 | 58.28 |
| Os09t0445500-01 | Rice | nucleus | 48.33 | 48.99 |
| Os02t0775600-01 | Rice | nucleus | 38.67 | 41.58 |
| Os03t0216000-01 | Rice | nucleus | 37.67 | 38.05 |
| Os01t0512700-00 | Rice | cytosol, nucleus, plastid | 19.67 | 24.38 |
| Os01t0132766-01 | Rice | nucleus | 21.67 | 24.34 |
Protein Annotations
| MapMan:15.5.15 | EntrezGene:4345777 | EMBL:AK058457 | ProteinID:BAD10314.1 | ProteinID:BAD10690.1 | ProteinID:BAF23904.1 |
| ProteinID:BAT05785.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR013087 | EnsemblPlantsGene:Os08g0463500 |
| EnsemblPlants:Os08t0463500-01 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF238 | UniProt:Q6YUB0 |
| SUPFAM:SSF57667 | UniParc:UPI000023B076 | RefSeq:XP_015650356.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
Zinc finger, C2H2-type domain containing protein. (Os08t0463500-01)
Coordinates
chr8:+:22754803..22756038
Molecular Weight (calculated)
31231.3 Da
IEP (calculated)
9.154
GRAVY (calculated)
-0.457
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVERDGRDQ PNIDSFSQLP FIRQAAREKP PSSSSGGSVV VPPAPIRLFG FDVPPDASTT ADVLGENKES AAAVVAAEGS KQTASGLDAI GGGGGSRKFE
101: CHYCCRNFPT SQALGGHQNA HKRERQRAKH AQFQTAMAMH HGHGQYYPLP DPYAAAFAAY PGHHHHHRFA ATAAAAMPPP PHYPSWAAGS RYYSGPGSIS
201: QPINGSPVAP AGMWRLPAAA SCVGLATTTT TAAPLPARRQ ERPAATIPSL LGGGEEPVVL GGAGSTSFSP STSSSSSSAS PHERRAQPAR KENVSLDLSL
101: CHYCCRNFPT SQALGGHQNA HKRERQRAKH AQFQTAMAMH HGHGQYYPLP DPYAAAFAAY PGHHHHHRFA ATAAAAMPPP PHYPSWAAGS RYYSGPGSIS
201: QPINGSPVAP AGMWRLPAAA SCVGLATTTT TAAPLPARRQ ERPAATIPSL LGGGEEPVVL GGAGSTSFSP STSSSSSSAS PHERRAQPAR KENVSLDLSL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.