CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050111_P001	Maize	nucleus	79.38	82.17
Os08t0463500-01	Rice	nucleus	59.69	64.67
OQU89585	Sorghum	nucleus	48.0	50.49
EES07621	Sorghum	nucleus	39.08	41.23
OQU80598	Sorghum	mitochondrion, nucleus, plastid	21.54	40.46
EER92638	Sorghum	nucleus	34.77	38.05
OQU76029	Sorghum	plastid	31.69	35.15
EER89601	Sorghum	cytosol, nucleus, plastid	17.54	27.4
EES02547	Sorghum	nucleus	19.69	22.54

Protein Annotations

MapMan:15.5.15	EntrezGene:8080654	UniProt:C5YM59	EnsemblPlants:EES13973	ProteinID:EES13973	ProteinID:EES13973.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR013087	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF238
EnsemblPlantsGene:SORBI_3007G151800	SUPFAM:SSF57667	UniParc:UPI0001A87A5B	RefSeq:XP_002444478.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:58414985..58420093

Molecular Weight (calculated)

33757.7 Da

IEP (calculated)

7.263

GRAVY (calculated)

-0.665

Length

325 amino acids

Sequence
(BLAST)

001: MSQRDAHDGG DDDYTTGRSA GAAASIDSFS QLPFIRPQKQ HQQPPPRSSA AGTSSGIRLF GVDVPPDAAA PGPAASPRAD VVEEEDSSVN ESTANANAAA
101: EPAAGSTDSG GGGGGGGGTR KFECHYCCRN FPTSQALGGH QNAHKRERQH AKRAQFQTAM AMHHSQYYYP HPAVPDPAAH LYPAFAAYRH HHRFTAAPPP
201: PPPHYPSWAG ASRYYSGPGS ISQPINGSPV TPSSGLWQQV PTGAAGIGVG TPAPPLAARR QEQPSVQPLP MMMLGGEEPA VVVRGAGSAP FSPSTSSSSS
301: SASPHERRPA PPESKENNVS LDLSL

Best Arabidopsis Sequence Match ( AT2G41940.1 )
(BLAST)

001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL

Arabidopsis Description

ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.