Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044980_P001 | Maize | nucleus | 71.33 | 84.27 |
| Zm00001d037136_P001 | Maize | nucleus | 74.74 | 82.33 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 44.71 | 75.72 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 20.82 | 55.96 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 42.66 | 51.87 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 41.64 | 50.83 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 40.96 | 50.0 |
| HORVU7Hr1G034940.1 | Barley | plastid | 17.06 | 40.0 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 32.42 | 39.92 |
| EES07621 | Sorghum | nucleus | 41.64 | 39.61 |
| GSMUA_Achr8P22740_001 | Banana | nucleus | 31.4 | 36.22 |
| GSMUA_Achr3P07800_001 | Banana | nucleus | 26.62 | 35.45 |
| Bra003317.1-P | Field mustard | nucleus | 27.65 | 34.32 |
| PGSC0003DMT400013992 | Potato | nucleus | 26.96 | 34.2 |
| CDY56241 | Canola | nucleus | 25.94 | 33.93 |
| KRG95435 | Soybean | nucleus | 29.01 | 33.33 |
| CDX71975 | Canola | nucleus | 28.67 | 33.33 |
| Solyc03g058160.2.1 | Tomato | nucleus | 24.91 | 33.18 |
| CDY57240 | Canola | nucleus | 26.96 | 33.05 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 31.06 | 32.97 |
| KRH67106 | Soybean | nucleus | 29.01 | 32.82 |
| AT3G58070.1 | Thale cress | nucleus | 28.33 | 32.81 |
| Bra007378.1-P | Field mustard | nucleus | 28.33 | 32.81 |
| CDY06054 | Canola | nucleus | 28.33 | 32.81 |
| CDY35394 | Canola | nucleus | 27.3 | 32.26 |
| GSMUA_Achr10P... | Banana | nucleus | 29.69 | 31.99 |
| Bra000245.1-P | Field mustard | nucleus | 26.96 | 31.85 |
| EES13973 | Sorghum | nucleus | 35.15 | 31.69 |
| Bra028724.1-P | Field mustard | nucleus | 19.45 | 31.32 |
| CDY04997 | Canola | nucleus | 19.11 | 31.28 |
| Solyc10g078970.1.1 | Tomato | nucleus | 21.84 | 31.22 |
| CDY14074 | Canola | nucleus | 19.11 | 31.11 |
| CDY06892 | Canola | nucleus | 26.96 | 31.1 |
| Bra016900.1-P | Field mustard | nucleus | 26.96 | 31.1 |
| CDY14805 | Canola | nucleus | 26.96 | 30.86 |
| CDX79901 | Canola | nucleus | 26.28 | 30.8 |
| AT2G41940.1 | Thale cress | nucleus | 26.96 | 30.74 |
| CDY22545 | Canola | nucleus | 26.28 | 30.68 |
| OQU89585 | Sorghum | nucleus | 32.08 | 30.42 |
| Bra004660.1-P | Field mustard | nucleus | 25.94 | 30.4 |
| AT5G06650.1 | Thale cress | nucleus | 19.45 | 29.84 |
| Solyc10g080600.1.1 | Tomato | nucleus | 23.55 | 29.49 |
| PGSC0003DMT400060839 | Potato | nucleus | 23.89 | 29.41 |
| KRH38054 | Soybean | nucleus | 30.38 | 28.99 |
| EER92638 | Sorghum | nucleus | 29.35 | 28.96 |
| Solyc10g078990.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 22.87 | 28.88 |
| PGSC0003DMT400029797 | Potato | nucleus | 24.91 | 28.29 |
| EER89601 | Sorghum | cytosol, nucleus, plastid | 18.77 | 26.44 |
| CDY64571 | Canola | nucleus | 25.26 | 23.49 |
| EES02547 | Sorghum | nucleus | 20.48 | 21.13 |
Protein Annotations
| EnsemblPlants:OQU76029 | EnsemblPlantsGene:SORBI_3010G077700 | EntrezGene:8077328 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF247 |
| PFscan:PS50157 | ProteinID:OQU76029 | ProteinID:OQU76029.1 | RefSeq:XP_002436664.1 | ScanProsite:PS00028 | SEG:seg |
| SUPFAM:SSF57667 | UniParc:UPI0001A89283 | UniProt:A0A1W0VRW8 | MapMan:15.5.15 | : | : |
Description
hypothetical protein
Coordinates
chr10:+:6481324..6482457
Molecular Weight (calculated)
29848.3 Da
IEP (calculated)
7.370
GRAVY (calculated)
-0.138
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPHDMHG VDSFAQLPFI PRGAAPARAA APKTTPAPAS SRVDAASIRL FGRDFPNDDQ QQAATAHQLL LLKEDAVAAV GDGEETAAAS AGGGERRFEC
101: HYCCRNFPTS QALGGHQNAH KRERQHARRA HLEASFAAHC GAYLPGAHLY GLFGYGGHTA LPPPPHYTAA TAAAVWAAGA VPGMCGGVGP VARPPVYGGV
201: AVPGMWRPSR TPPGAGSGGG FVAAGRPVGA DPAAGYGEMI MAGNDDKVAM SVVTSLPPLP SPSCLSGGQQ SAEMIGRPEL GHKDGVISLD LCL
101: HYCCRNFPTS QALGGHQNAH KRERQHARRA HLEASFAAHC GAYLPGAHLY GLFGYGGHTA LPPPPHYTAA TAAAVWAAGA VPGMCGGVGP VARPPVYGGV
201: AVPGMWRPSR TPPGAGSGGG FVAAGRPVGA DPAAGYGEMI MAGNDDKVAM SVVTSLPPLP SPSCLSGGQQ SAEMIGRPEL GHKDGVISLD LCL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.