Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 62.68 | 63.6 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 19.2 | 48.62 |
| GSMUA_Achr1P22000_001 | Banana | nucleus | 40.58 | 43.08 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 36.59 | 42.44 |
| GSMUA_Achr3P07800_001 | Banana | nucleus | 33.7 | 42.27 |
| PGSC0003DMT400013992 | Potato | nucleus | 34.06 | 40.69 |
| GSMUA_Achr8P22740_001 | Banana | nucleus | 36.59 | 39.76 |
| Solyc03g058160.2.1 | Tomato | nucleus | 31.16 | 39.09 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 23.91 | 38.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.54 | 37.25 |
| Zm00001d018247_P001 | Maize | nucleus | 37.32 | 36.27 |
| CDY06892 | Canola | nucleus | 33.33 | 36.22 |
| Bra016900.1-P | Field mustard | nucleus | 33.33 | 36.22 |
| KRH67106 | Soybean | nucleus | 33.7 | 35.91 |
| KRG95435 | Soybean | nucleus | 32.97 | 35.69 |
| CDX79901 | Canola | nucleus | 32.25 | 35.6 |
| CDY14805 | Canola | nucleus | 32.97 | 35.55 |
| Os02t0775600-01 | Rice | nucleus | 35.87 | 35.48 |
| CDY35394 | Canola | nucleus | 31.52 | 35.08 |
| CDY22545 | Canola | nucleus | 31.88 | 35.06 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 30.43 | 34.85 |
| Bra004660.1-P | Field mustard | nucleus | 31.52 | 34.8 |
| Bra000245.1-P | Field mustard | nucleus | 31.16 | 34.68 |
| Zm00001d044980_P001 | Maize | nucleus | 30.8 | 34.27 |
| KRH38054 | Soybean | nucleus | 38.04 | 34.2 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 29.71 | 34.17 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 29.71 | 34.17 |
| EES07621 | Sorghum | nucleus | 37.68 | 33.77 |
| PGSC0003DMT400060839 | Potato | nucleus | 28.99 | 33.61 |
| Solyc10g080600.1.1 | Tomato | nucleus | 28.26 | 33.33 |
| AT2G41940.1 | Thale cress | nucleus | 30.8 | 33.07 |
| Zm00001d052118_P001 | Maize | nucleus | 36.59 | 33.01 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 34.06 | 32.98 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 34.06 | 32.87 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 33.7 | 32.75 |
| Zm00001d037136_P001 | Maize | nucleus | 31.52 | 32.71 |
| CDX71975 | Canola | nucleus | 29.35 | 32.14 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 32.61 | 31.91 |
| CDY57240 | Canola | nucleus | 27.54 | 31.8 |
| Bra003317.1-P | Field mustard | nucleus | 27.17 | 31.78 |
| Solyc10g078970.1.1 | Tomato | nucleus | 23.55 | 31.71 |
| CDY56241 | Canola | nucleus | 25.72 | 31.7 |
| Bra007378.1-P | Field mustard | nucleus | 28.99 | 31.62 |
| CDY06054 | Canola | nucleus | 28.99 | 31.62 |
| OQU76029 | Sorghum | plastid | 32.97 | 31.06 |
| PGSC0003DMT400029797 | Potato | nucleus | 28.62 | 30.62 |
| Solyc10g078990.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 25.72 | 30.6 |
| AT3G58070.1 | Thale cress | nucleus | 27.54 | 30.04 |
| CDY64571 | Canola | nucleus | 30.43 | 26.67 |
| GSMUA_Achr7P11950_001 | Banana | nucleus | 18.48 | 23.83 |
| GSMUA_Achr4P06770_001 | Banana | nucleus | 17.75 | 23.11 |
| GSMUA_Achr4P13760_001 | Banana | nucleus | 16.67 | 22.44 |
| GSMUA_Achr3P21070_001 | Banana | nucleus | 18.84 | 22.32 |
| GSMUA_Achr8P31650_001 | Banana | nucleus | 15.94 | 22.11 |
| GSMUA_Achr8P18340_001 | Banana | nucleus | 18.12 | 21.74 |
| HORVU7Hr1G034940.1 | Barley | plastid | 9.78 | 21.6 |
| GSMUA_Achr9P21420_001 | Banana | nucleus | 17.39 | 20.87 |
| GSMUA_Achr5P09990_001 | Banana | cytosol, mitochondrion, nucleus | 15.22 | 20.59 |
| GSMUA_Achr2P14620_001 | Banana | nucleus | 15.94 | 20.09 |
| GSMUA_Achr11P... | Banana | nucleus | 17.39 | 18.82 |
| GSMUA_Achr2P07210_001 | Banana | nucleus | 15.94 | 18.11 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P02080_001 | EnsemblPlants:GSMUA_Achr3T02080_001 | EnsemblPlantsGene:GSMUA_Achr3G02080_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF226 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI000294A166 | UniProt:M0SB26 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Putative ZOS3-05 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G02080_001]
Coordinates
chr3:-:1384949..1385779
Molecular Weight (calculated)
29437.7 Da
IEP (calculated)
9.286
GRAVY (calculated)
-0.417
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEREARDLM SVDSFSQLPF IRPGPKPSTA ASGIRLFGIE VPHHHNAKED NASKDHAATA TTSTNGGGET ARKFECHYCC RHFPTSQALG GHQNAHKRER
101: QHAKRAHLQS AAIAAVHHSQ AAIYGHHVHG LFNYHHPLTP LSPAAARLAV DSSAIPPRYP YGHTANARSG ACFHGCLGPV AQPITVSPLP SLWRAPGIVH
201: GGAASVELIH GHSRVPSAVA RGDHEPRFTG SVDGGVRMMG GNNLDTAAAS SATPKTQFAH QLMPNMKENV SLDLHL
101: QHAKRAHLQS AAIAAVHHSQ AAIYGHHVHG LFNYHHPLTP LSPAAARLAV DSSAIPPRYP YGHTANARSG ACFHGCLGPV AQPITVSPLP SLWRAPGIVH
201: GGAASVELIH GHSRVPSAVA RGDHEPRFTG SVDGGVRMMG GNNLDTAAAS SATPKTQFAH QLMPNMKENV SLDLHL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.