Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P22740_001 | Banana | nucleus | 44.23 | 45.28 |
| GSMUA_Achr10P... | Banana | nucleus | 45.0 | 43.01 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.08 | 42.16 |
| GSMUA_Achr3P07800_001 | Banana | nucleus | 35.0 | 41.36 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 43.08 | 40.58 |
| TraesCS4D01G244500.1 | Wheat | nucleus | 37.31 | 34.4 |
| TraesCS4A01G079300.1 | Wheat | nucleus | 37.31 | 34.4 |
| TraesCS4B01G244900.1 | Wheat | nucleus | 36.92 | 34.29 |
| Os03t0216000-01 | Rice | nucleus | 38.46 | 33.67 |
| EER92638 | Sorghum | nucleus | 38.08 | 33.33 |
| Zm00001d028222_P001 | Maize | nucleus | 39.62 | 32.29 |
| GSMUA_Achr4P13760_001 | Banana | nucleus | 21.15 | 26.83 |
| GSMUA_Achr5P09990_001 | Banana | cytosol, mitochondrion, nucleus | 20.0 | 25.49 |
| GSMUA_Achr4P06770_001 | Banana | nucleus | 20.38 | 25.0 |
| GSMUA_Achr2P14620_001 | Banana | nucleus | 19.23 | 22.83 |
| GSMUA_Achr9P21420_001 | Banana | nucleus | 20.0 | 22.61 |
| GSMUA_Achr3P21070_001 | Banana | nucleus | 20.0 | 22.32 |
| GSMUA_Achr8P18340_001 | Banana | nucleus | 19.62 | 22.17 |
| GSMUA_Achr7P11950_001 | Banana | nucleus | 17.69 | 21.5 |
| GSMUA_Achr8P31650_001 | Banana | nucleus | 16.15 | 21.11 |
| GSMUA_Achr2P07210_001 | Banana | nucleus | 17.69 | 18.93 |
| GSMUA_Achr11P... | Banana | nucleus | 18.46 | 18.82 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P22000_001 | EnsemblPlants:GSMUA_Achr1T22000_001 | EnsemblPlantsGene:GSMUA_Achr1G22000_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF226 | PFscan:PS50157 | ScanProsite:PS00028 |
| SEG:seg | UniParc:UPI0002964A61 | UniProt:M0S208 | MapMan:15.5.15 | : | : |
Description
Putative ZOS2-17 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G22000_001]
Coordinates
chr1:+:16535131..16535913
Molecular Weight (calculated)
27867.4 Da
IEP (calculated)
7.239
GRAVY (calculated)
-0.567
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRETRDFM SVDAFSQLPF LRPAHDKPSS NASGIRLFGV EVPREPHEDP REPHDAEESS KDLTANTNTG DGGGGGSESG RRFECHYCCR HFPTSQALGG
101: HQNAHKRERH HAKQAQLHPA MVASLHHQPS ALDGHGVYGF NYHHQHLHHC RLGFDPAAPP HYSPWRTGAS VGARFFMGPG AAAAPITGSP LIRRVPAGVH
201: GGGRTGLIPS SDGVMPLPLI REDVAGVGWS GNAAISSSSS SSQFAYESMQ TETVSLDLHL
101: HQNAHKRERH HAKQAQLHPA MVASLHHQPS ALDGHGVYGF NYHHQHLHHC RLGFDPAAPP HYSPWRTGAS VGARFFMGPG AAAAPITGSP LIRRVPAGVH
201: GGGRTGLIPS SDGVMPLPLI REDVAGVGWS GNAAISSSSS SSQFAYESMQ TETVSLDLHL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.