Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G079300.1 | Wheat | nucleus | 67.0 | 70.57 |
| TraesCS4B01G244900.1 | Wheat | nucleus | 66.33 | 70.36 |
| EER92638 | Sorghum | nucleus | 70.03 | 70.03 |
| TraesCS4D01G244500.1 | Wheat | nucleus | 65.32 | 68.79 |
| Zm00001d028222_P001 | Maize | nucleus | 70.37 | 65.52 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.6 | 38.73 |
| GSMUA_Achr1P22000_001 | Banana | nucleus | 33.67 | 38.46 |
| Os02t0775600-01 | Rice | nucleus | 36.03 | 38.35 |
| Os08t0463500-01 | Rice | nucleus | 38.05 | 37.67 |
| Os09t0445500-01 | Rice | nucleus | 33.67 | 33.78 |
| Os01t0132766-01 | Rice | nucleus | 19.87 | 22.1 |
| Os01t0512700-00 | Rice | cytosol, nucleus, plastid | 17.85 | 21.9 |
Protein Annotations
| MapMan:15.5.15 | EntrezGene:4332064 | ProteinID:ABF94643.1 | EMBL:AK109827 | ProteinID:BAF11295.1 | ProteinID:BAS82968.1 |
| ProteinID:EAZ26065.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | EnsemblPlantsGene:Os03g0216000 | EnsemblPlants:Os03t0216000-01 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF226 | UniProt:Q10PZ3 | UniParc:UPI0000DB4150 | RefSeq:XP_015631294.1 |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
Similar to Zinc-finger protein KNUCKLES. (Os03t0216000-01)
Coordinates
chr3:-:6098433..6100341
Molecular Weight (calculated)
30406.5 Da
IEP (calculated)
8.677
GRAVY (calculated)
-0.259
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGGEGGGG AASVRDQPPH DFANVASFSE LPFLRPAPAP RESPNNSAIR LFGIDVPHAS SSPDGKASKE SVVVSTAAAA ASTHGAAAAA IAAAADSSRK
101: FECHYCCRHF PTSQALGGHQ NAHKRERQHA KRVQMQTAMA AAAAAASGAH HHHHHHQLLG YPQHHHRFGL AGPTVAALYQ HPSWPTMSGG GGGISSIGPQ
201: FYSGIGSVTQ PINGSPLPAG LWRPGPMAAP PLLAGERRPV AVSTSSVFRG DEPRASASLV ASQTASSSLL LSPQGQFACE QPPATTAAEG VSLDLHL
101: FECHYCCRHF PTSQALGGHQ NAHKRERQHA KRVQMQTAMA AAAAAASGAH HHHHHHQLLG YPQHHHRFGL AGPTVAALYQ HPSWPTMSGG GGGISSIGPQ
201: FYSGIGSVTQ PINGSPLPAG LWRPGPMAAP PLLAGERRPV AVSTSSVFRG DEPRASASLV ASQTASSSLL LSPQGQFACE QPPATTAAEG VSLDLHL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.