Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G079300.1 | Wheat | nucleus | 96.45 | 96.45 |
| TraesCS4B01G244900.1 | Wheat | nucleus | 93.62 | 94.29 |
| EER92638 | Sorghum | nucleus | 69.5 | 65.99 |
| Os03t0216000-01 | Rice | nucleus | 68.79 | 65.32 |
| Zm00001d028222_P001 | Maize | nucleus | 68.44 | 60.5 |
| GSMUA_Achr1P22000_001 | Banana | nucleus | 34.4 | 37.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.24 | 36.27 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 28.72 | 33.75 |
| TraesCS5D01G236500.1 | Wheat | nucleus | 35.46 | 33.44 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 33.33 | 32.98 |
| TraesCS3D01G365900.1 | Wheat | nucleus | 17.38 | 24.75 |
| TraesCS3D01G044000.1 | Wheat | nucleus | 18.44 | 20.16 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G244500.1 | EnsemblPlantsGene:TraesCS4D01G244500 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF226 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | MapMan:15.5.15 | : | : |
Description
No Description!
Coordinates
chr4D:-:409168946..409169794
Molecular Weight (calculated)
29188.9 Da
IEP (calculated)
8.383
GRAVY (calculated)
-0.470
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGGGGGGE GGVGGGAESV REPHGFGNVA SFSELPFLRS SAPPRESPNS GIRLFGIDVP HASPEERIKE ATAASSATPS ATTQSSSGAA ITAASAAPDS
101: NRKFECHYCC RHFPTSQALG GHQNAHKRER QHAKRVQMQS AMAAAAAAAG SAHHHHHLLG YPQHRFSATL YPSWTTVSGG LSYGQQFYRG IGAVGQPING
201: NPLPEAQWRR PLAAHGNMGM PLAGERRPVT LHMFGEEQRA SPSHGAASPS SSSLLLSPQG QSACEQPATT AAPEGVSLDL HL
101: NRKFECHYCC RHFPTSQALG GHQNAHKRER QHAKRVQMQS AMAAAAAAAG SAHHHHHLLG YPQHRFSATL YPSWTTVSGG LSYGQQFYRG IGAVGQPING
201: NPLPEAQWRR PLAAHGNMGM PLAGERRPVT LHMFGEEQRA SPSHGAASPS SSSLLLSPQG QSACEQPATT AAPEGVSLDL HL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.