Factsheet for Os01t0132766-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039977_P001	Maize	nucleus	81.27	81.27
EES02547	Sorghum	nucleus	81.65	76.76
Zm00001d008562_P001	Maize	nucleus	77.15	76.58
HORVU3Hr1G007060.1	Barley	nucleus	70.41	72.59
TraesCS3D01G044000.1	Wheat	nucleus	69.66	72.09
TraesCS3B01G048000.1	Wheat	nucleus	69.66	71.81
TraesCS3A01G036000.1	Wheat	nucleus	68.91	71.6
GSMUA_Achr2P07210_001	Banana	nucleus	47.94	52.67
GSMUA_Achr7P11950_001	Banana	nucleus	41.57	51.87
GSMUA_Achr8P18340_001	Banana	nucleus	43.45	50.43
GSMUA_Achr3P21070_001	Banana	nucleus	43.45	49.79
GSMUA_Achr8P31650_001	Banana	nucleus	34.46	46.23
GSMUA_Achr4P13760_001	Banana	nucleus	33.33	43.41
GSMUA_Achr9P21420_001	Banana	nucleus	35.96	41.74
GSMUA_Achr4P06770_001	Banana	nucleus	32.58	41.04
GSMUA_Achr5P09990_001	Banana	cytosol, mitochondrion, nucleus	29.21	38.24
GSMUA_Achr11P...	Banana	nucleus	33.71	35.29
Os01t0512700-00	Rice	cytosol, nucleus, plastid	31.09	34.3
GSMUA_Achr2P14620_001	Banana	nucleus	26.59	32.42
Os08t0463500-01	Rice	nucleus	24.34	21.67
Os09t0445500-01	Rice	nucleus	22.1	19.93
Os03t0216000-01	Rice	nucleus	22.1	19.87
Os02t0775600-01	Rice	nucleus	19.85	19.0

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:9268514	EMBL:AK243652	ProteinID:BAB64610.1	ProteinID:BAH90892.1
ProteinID:BAS70232.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR013087	EnsemblPlantsGene:Os01g0132766	EnsemblPlants:Os01t0132766-01	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF300	UniProt:Q943S6	SUPFAM:SSF57667	UniParc:UPI00000A3F7B
RefSeq:XP_015618605.1	RefSeq:XP_015618613.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

Zinc finger, C2H2-like domain containing protein. (Os01t0132766-01)

Coordinates

chr1:-:1801983..1803280

Molecular Weight (calculated)

26874.1 Da

IEP (calculated)

6.592

GRAVY (calculated)

-0.183

Length

267 amino acids

Sequence
(BLAST)

001: MSMTSPRLKL FGFDVSEEET AEHEEQYSAE PESAPVCGGN GGGGGGGSDS SSSSTTTTTT ATAGGDGRRY ECQYCCREFA NSQALGGHQN AHKKERQQLK
101: RAQLQAAAAA AGRVAGGAAA LYPRANPMVS AFAPTPHLLG GGEAGPTSWV YFSPRAAAVA GGAQGQQFHV SHGCVFPARG AGPAAVAAAS PAVFSYTPAT
201: SAAAVAAASA PYVTTDEHHG RRIHASSAAS LARYPGPAMV VAEPVATVPE DTCLGLDLQL SLAPAGL

Best Arabidopsis Sequence Match ( AT1G68360.1 )
(BLAST)

001: MEELDFSSKT TTSRLKLFGF SVDGEEDFSD QSVKTNLSSV SPERGEFPAG SSGRSGGGVR SRGGGGGGGE RKYECQYCCR EFGNSQALGG HQNAHKKERQ
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH

Arabidopsis Description

GIS3Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.