Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020653_P001 | Maize | nucleus | 63.51 | 64.16 |
| OQU89585 | Sorghum | nucleus | 64.86 | 62.14 |
| Zm00001d005837_P001 | Maize | nucleus | 60.47 | 61.94 |
| TraesCS5D01G236500.1 | Wheat | nucleus | 62.16 | 61.54 |
| TraesCS5A01G231500.1 | Wheat | nucleus | 61.82 | 60.8 |
| HORVU5Hr1G066750.1 | Barley | nucleus | 61.49 | 60.67 |
| TraesCS5B01G229800.1 | Wheat | nucleus | 62.16 | 60.53 |
| Os08t0463500-01 | Rice | nucleus | 48.99 | 48.33 |
| Os02t0775600-01 | Rice | nucleus | 36.49 | 38.71 |
| Os03t0216000-01 | Rice | nucleus | 33.78 | 33.67 |
| Os01t0512700-00 | Rice | cytosol, nucleus, plastid | 19.59 | 23.97 |
| Os01t0132766-01 | Rice | nucleus | 19.93 | 22.1 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | ProteinID:BAF25217.1 | ProteinID:BAT08335.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 |
| EnsemblPlantsGene:Os09g0445500 | EnsemblPlants:Os09t0445500-01 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF238 |
| UniProt:Q0J1E8 | SUPFAM:SSF57667 | UniParc:UPI0000DD974A | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
Zinc finger, C2H2-like domain containing protein. (Os09t0445500-01)
Coordinates
chr9:+:16610187..16611618
Molecular Weight (calculated)
30882.3 Da
IEP (calculated)
9.766
GRAVY (calculated)
-0.412
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEHDAKHVG DVPAAAGIES FSQLPFVRPR PAAMAGSSPA SSIRLFGFEL PPDGVVSAAG LGGGGGGGGR KFECHYCCRN FPTSQALGGH QNAHKRERQH
101: AKRAQFQSAM AMHAHYPAYP AYASYYGSHR FGPSPPHMAP PPPPPYPSWS NHHHLPPGGP APMVAARYYG PAPPGSVSHP INGSPVVPAA AALWRVPAAA
201: IAVAAAAAPL ARQERQPPLS LAGGREEEDA MVEVRRGNGV GGAAAAVVQL QPGSRLSRSS SSSSSASSSS QHHHERRRLG DLAEINRENV SLDLTL
101: AKRAQFQSAM AMHAHYPAYP AYASYYGSHR FGPSPPHMAP PPPPPYPSWS NHHHLPPGGP APMVAARYYG PAPPGSVSHP INGSPVVPAA AALWRVPAAA
201: IAVAAAAAPL ARQERQPPLS LAGGREEEDA MVEVRRGNGV GGAAAAVVQL QPGSRLSRSS SSSSSASSSS QHHHERRRLG DLAEINRENV SLDLTL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.