Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89585 | Sorghum | nucleus | 87.03 | 82.52 |
| Zm00001d005837_P001 | Maize | nucleus | 81.23 | 82.35 |
| TraesCS5D01G236500.1 | Wheat | nucleus | 66.89 | 65.55 |
| TraesCS5A01G231500.1 | Wheat | nucleus | 66.55 | 64.78 |
| HORVU5Hr1G066750.1 | Barley | nucleus | 66.21 | 64.67 |
| TraesCS5B01G229800.1 | Wheat | nucleus | 66.89 | 64.47 |
| Os09t0445500-01 | Rice | nucleus | 64.16 | 63.51 |
| Zm00001d050111_P001 | Maize | nucleus | 50.17 | 46.82 |
| Zm00001d018247_P001 | Maize | nucleus | 38.91 | 40.14 |
| Zm00001d052118_P001 | Maize | nucleus | 38.91 | 37.25 |
| Zm00001d044980_P001 | Maize | nucleus | 29.35 | 34.68 |
| Zm00001d028222_P001 | Maize | nucleus | 34.81 | 31.97 |
| Zm00001d037136_P001 | Maize | nucleus | 28.67 | 31.58 |
| Zm00001d045738_P001 | Maize | nucleus | 20.14 | 26.46 |
| Zm00001d039977_P001 | Maize | nucleus | 20.14 | 22.1 |
| Zm00001d008562_P001 | Maize | nucleus | 20.14 | 21.93 |
Protein Annotations
| EnsemblPlants:Zm00001d020653_P001 | EnsemblPlants:Zm00001d020653_T001 | EnsemblPlantsGene:Zm00001d020653 | EntrezGene:103632830 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF238 |
| PFscan:PS50157 | ProteinID:ONM55335.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI000220AA74 |
| UniProt:A0A1D6I5E4 | MapMan:15.5.15 | : | : | : | : |
Description
Zinc finger protein 8
Coordinates
chr7:+:126640196..126641077
Molecular Weight (calculated)
30759.5 Da
IEP (calculated)
9.594
GRAVY (calculated)
-0.638
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEQDGQHVG GSPPDAAIES FSQLPFVRPK PPQPASSSSP SSIRLFGFEV PPDAATSSTA TSDATAASAT VAGQAAASGA AGAGAGASDG TGGGRKFECH
101: YCCRNFPTSQ ALGGHQNAHK RERQHAKRAQ YQSAMAMHHA HYPGHPHAYP AFTSYHQQQR FGMARYEPPP PGPPPHYPSW SPQAAPPVVP RYYGRACSLS
201: QPINGSPIPA AALWRVPAVT AAAPLVRQER PTPLSLGGRD EEEAMTGARR GNVVAARQVG SRSSSSSSTA SQHERRRAGA AENRENVSLD LTL
101: YCCRNFPTSQ ALGGHQNAHK RERQHAKRAQ YQSAMAMHHA HYPGHPHAYP AFTSYHQQQR FGMARYEPPP PGPPPHYPSW SPQAAPPVVP RYYGRACSLS
201: QPINGSPIPA AALWRVPAVT AAAPLVRQER PTPLSLGGRD EEEAMTGARR GNVVAARQVG SRSSSSSSTA SQHERRRAGA AENRENVSLD LTL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.