Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13973 | Sorghum | nucleus | 82.17 | 79.38 |
| Os08t0463500-01 | Rice | nucleus | 58.28 | 61.0 |
| Zm00001d005837_P001 | Maize | nucleus | 46.82 | 50.87 |
| Zm00001d020653_P001 | Maize | nucleus | 46.82 | 50.17 |
| Zm00001d018247_P001 | Maize | nucleus | 35.99 | 39.79 |
| Zm00001d044980_P001 | Maize | nucleus | 29.62 | 37.5 |
| Zm00001d052118_P001 | Maize | nucleus | 36.31 | 37.25 |
| Zm00001d028222_P001 | Maize | nucleus | 35.03 | 34.48 |
| Zm00001d037136_P001 | Maize | nucleus | 28.98 | 34.21 |
| Zm00001d045738_P001 | Maize | nucleus | 18.47 | 26.01 |
| Zm00001d039977_P001 | Maize | nucleus | 19.43 | 22.85 |
| Zm00001d008562_P001 | Maize | nucleus | 19.43 | 22.68 |
Protein Annotations
| EMBL:BT087721 | EMBL:EU954300 | EnsemblPlants:Zm00001d050111_P001 | EnsemblPlants:Zm00001d050111_T001 | EnsemblPlantsGene:Zm00001d050111 | EntrezGene:100275104 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF238 | PFscan:PS50157 | ProteinID:AQK51929.1 | ScanProsite:PS00028 | SEG:seg |
| SUPFAM:SSF57667 | UniParc:UPI000182B525 | UniProt:B6SNI5 | MapMan:15.5.15 | : | : |
Description
Zinc finger protein 8
Coordinates
chr4:-:66517008..66517952
Molecular Weight (calculated)
32700.7 Da
IEP (calculated)
7.475
GRAVY (calculated)
-0.613
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MSERDARDDG NTTGRSAPAA GIDSFSQLPF IRPLAREKQK QQPPPSSGTS SGIRLFGVDV PPDAVVPAPA SPADDVEEED SFVNESTANN SAAETAAGAG
101: GGGSGDGDGV GGARRKFECH YCCRNFPTSQ ALGGHQNAHK RERQHAKRAQ FQTAMAMHQH RSQYYYPHPV PDPAHLYPAF AAYRHHHRFA AATPPPHYPS
201: WAGATSRHYS SGPGSISQPI DGSPVTPPSG LWLQVPTGGG ILVGGAPSPL AAARRQEQPV QPLPVLGAEE PAVVGRGAAG SAPFSPSTSS SSSPAASPHK
301: RPAPPENVSL DLSL
101: GGGSGDGDGV GGARRKFECH YCCRNFPTSQ ALGGHQNAHK RERQHAKRAQ FQTAMAMHQH RSQYYYPHPV PDPAHLYPAF AAYRHHHRFA AATPPPHYPS
201: WAGATSRHYS SGPGSISQPI DGSPVTPPSG LWLQVPTGGG ILVGGAPSPL AAARRQEQPV QPLPVLGAEE PAVVGRGAAG SAPFSPSTSS SSSPAASPHK
301: RPAPPENVSL DLSL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.