Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 80.67 | 76.8 |
| CDY34553 | Canola | nucleus | 42.02 | 40.32 |
| CDY34552 | Canola | nucleus | 39.5 | 36.72 |
| Bra016718.1-P | Field mustard | nucleus | 33.61 | 36.36 |
| Bra016719.1-P | Field mustard | nucleus | 46.22 | 35.26 |
| AT1G13930.1 | Thale cress | nucleus | 43.7 | 33.55 |
| CDX96875 | Canola | nucleus | 34.45 | 32.54 |
| CDY37195 | Canola | nucleus | 42.86 | 29.65 |
| Bra026551.1-P | Field mustard | nucleus | 41.18 | 29.34 |
| Bra024775.1-P | Field mustard | nucleus | 42.86 | 28.81 |
| CDY02995 | Canola | nucleus | 42.86 | 28.81 |
| AT2G03440.1 | Thale cress | nucleus | 44.54 | 28.34 |
| CDY45164 | Canola | nucleus | 42.02 | 28.25 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 36.97 | 28.03 |
| Zm00001d008397_P001 | Maize | extracellular | 37.82 | 27.27 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 36.13 | 27.22 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 36.13 | 27.22 |
| CDY53944 | Canola | cytosol | 33.61 | 27.03 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 35.29 | 26.92 |
| Os10t0330000-01 | Rice | plasma membrane | 36.97 | 26.67 |
| EES02656 | Sorghum | cytosol | 34.45 | 25.79 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 38.66 | 24.08 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 42.86 | 17.23 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 43.7 | 15.95 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 42.02 | 14.58 |
| Solyc05g012570.2.1 | Tomato | nucleus | 42.86 | 12.75 |
| OQU93026 | Sorghum | nucleus | 43.7 | 12.47 |
| Zm00001d028024_P001 | Maize | extracellular | 42.86 | 11.67 |
| PGSC0003DMT400072972 | Potato | cytosol | 42.02 | 9.07 |
| Os03t0210600-01 | Rice | plasma membrane | 15.97 | 6.33 |
Protein Annotations
| EMBL:ACUP02004698 | EMBL:BT098859 | EnsemblPlants:KRH50534 | EnsemblPlantsGene:GLYMA_07G226600 | EntrezGene:100813859 | PANTHER:PTHR35098 |
| ProteinID:KRH50534 | ProteinID:KRH50534.1 | SEG:seg | UniParc:UPI0001B17207 | UniProt:C6TMA8 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr7:-:40399076..40400216
Molecular Weight (calculated)
12237.0 Da
IEP (calculated)
4.450
GRAVY (calculated)
-0.712
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEESQNKP PSEQSTTELI TSAKLVAEAA QSALKSDSDK VDKAKVADAA GDLLDAAGKY GKLDDKQGIG QYVDKAADYL HNYQGDNTTA PSQPAESKGE
101: ESGGGLGGLA NLAGGFFKK
101: ESGGGLGGLA NLAGGFFKK
001: MNFISDQVKK LSSSTPEEPD HNKPVEGTET ATRPATNAEL MASAKVVAEA AQAAARNESD KLDKGKVAGA SADILDAAEK YGKFDEKSST GQYLDKAEKY
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
Arabidopsis Description
At1g13930/F16A14.27 [Source:UniProtKB/TrEMBL;Acc:Q9XI93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.