Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96875 | Canola | nucleus | 92.73 | 80.95 |
| Bra016719.1-P | Field mustard | nucleus | 70.91 | 50.0 |
| AT1G13930.1 | Thale cress | nucleus | 62.73 | 44.52 |
| KRH50534 | Soybean | nucleus | 36.36 | 33.61 |
| Bra026551.1-P | Field mustard | nucleus | 50.91 | 33.53 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 36.36 | 32.0 |
| Bra024775.1-P | Field mustard | nucleus | 49.09 | 30.51 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 39.09 | 27.39 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 37.27 | 25.95 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 37.27 | 25.95 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 36.36 | 25.64 |
| EES02656 | Sorghum | cytosol | 34.55 | 23.9 |
| Os10t0330000-01 | Rice | plasma membrane | 34.55 | 23.03 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 37.27 | 21.47 |
| Zm00001d008397_P001 | Maize | extracellular | 31.82 | 21.21 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 29.09 | 10.81 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 30.0 | 10.12 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 30.0 | 9.62 |
| Solyc05g012570.2.1 | Tomato | nucleus | 32.73 | 9.0 |
| OQU93026 | Sorghum | nucleus | 30.91 | 8.15 |
| Zm00001d028024_P001 | Maize | extracellular | 30.0 | 7.55 |
| PGSC0003DMT400072972 | Potato | cytosol | 30.0 | 5.99 |
| Os03t0210600-01 | Rice | plasma membrane | 10.91 | 4.0 |
Protein Annotations
Description
AT1G13930 (E=2e-025) | Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress.
Coordinates
chrA08:-:19661122..19661454
Molecular Weight (calculated)
11701.3 Da
IEP (calculated)
4.279
GRAVY (calculated)
-0.769
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQTNTKPVE GTETANRPAS PSELMASAKV VAEAAQDAAR NESDKLDKAK VAGDSADILD VDQEYGRFDK SDAGQYFEKA EKYLKDFESS GAVVTPYTPD
101: IGAPPPSASR
101: IGAPPPSASR
001: MNFISDQVKK LSSSTPEEPD HNKPVEGTET ATRPATNAEL MASAKVVAEA AQAAARNESD KLDKGKVAGA SADILDAAEK YGKFDEKSST GQYLDKAEKY
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
Arabidopsis Description
At1g13930/F16A14.27 [Source:UniProtKB/TrEMBL;Acc:Q9XI93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.