Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028024_P001 | Maize | extracellular | 59.0 | 40.5 |
| OQU93026 | Sorghum | nucleus | 53.33 | 38.37 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 40.67 | 37.42 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 41.67 | 36.44 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 35.0 | 35.47 |
| CDY53944 | Canola | cytosol | 9.0 | 18.24 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 7.33 | 17.6 |
| Os10t0330000-01 | Rice | plasma membrane | 9.67 | 17.58 |
| CDY37195 | Canola | nucleus | 10.0 | 17.44 |
| Bra026551.1-P | Field mustard | nucleus | 9.33 | 16.77 |
| CDY34553 | Canola | nucleus | 6.67 | 16.13 |
| KRH50534 | Soybean | nucleus | 6.33 | 15.97 |
| CDY02995 | Canola | nucleus | 9.0 | 15.25 |
| Bra024775.1-P | Field mustard | nucleus | 9.0 | 15.25 |
| CDY45164 | Canola | nucleus | 9.0 | 15.25 |
| AT2G03440.1 | Thale cress | nucleus | 9.33 | 14.97 |
| AT1G13930.1 | Thale cress | nucleus | 7.67 | 14.84 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 9.0 | 14.14 |
| Bra016719.1-P | Field mustard | nucleus | 7.33 | 14.1 |
| Solyc05g012570.2.1 | Tomato | nucleus | 15.0 | 11.25 |
| Bra016718.1-P | Field mustard | nucleus | 4.0 | 10.91 |
| PGSC0003DMT400072972 | Potato | cytosol | 19.0 | 10.34 |
| CDX96875 | Canola | nucleus | 4.33 | 10.32 |
| CDY34552 | Canola | nucleus | 3.67 | 8.59 |
Protein Annotations
| EnsemblPlants:Os03t0210600-01 | EnsemblPlantsGene:Os03g0210600 | PANTHER:PTHR35098 | PANTHER:PTHR35098:SF1 | ProteinID:BAS82909.1 | SEG:seg |
| UniParc:UPI000393ABCD | UniProt:A0A0P0VUL0 | MapMan:35.2 | : | : | : |
Description
Conserved hypothetical protein. (Os03t0210600-01)
Coordinates
chr3:-:5774735..5775940
Molecular Weight (calculated)
31760.5 Da
IEP (calculated)
5.424
GRAVY (calculated)
-1.764
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: AEEYLHQYGR KEGSAGSGGG GKYQDEGGEG KYKKKPGHGG GRYEEEEEED YKKKPTSGGG GGYGGGRYEE EDNYKKKPTS GGGGYGGGMY EEEDDYKKKP
101: SSGGGGGYGG GRYEEEDEYR KKPSGGGYGG GRYEEEEDDY MKKPSAGAGG YGGGGRYEDE YKKKPGGGHG GGRYEEDDEY NKKPSGGYGY GASSGGGHGG
201: RYEEDDYKKK PSAHSGGGGG RYEEEEGYKK PSGHGGGRYG KEEEEDDKKK KKHGEGSEGG MGDYLKLAQG LMKKQGGEGE SGGGGMGDYL KLAEGFLKKR
101: SSGGGGGYGG GRYEEEDEYR KKPSGGGYGG GRYEEEEDDY MKKPSAGAGG YGGGGRYEDE YKKKPGGGHG GGRYEEDDEY NKKPSGGYGY GASSGGGHGG
201: RYEEDDYKKK PSAHSGGGGG RYEEEEGYKK PSGHGGGRYG KEEEEDDKKK KKHGEGSEGG MGDYLKLAQG LMKKQGGEGE SGGGGMGDYL KLAEGFLKKR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.