Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026551.1-P | Field mustard | nucleus | 77.03 | 68.26 |
| CDY37195 | Canola | nucleus | 77.03 | 66.28 |
| CDY02995 | Canola | nucleus | 62.84 | 52.54 |
| CDY45164 | Canola | nucleus | 62.16 | 51.98 |
| CDY34553 | Canola | nucleus | 41.22 | 49.19 |
| AT2G03440.1 | Thale cress | nucleus | 59.46 | 47.06 |
| CDY34552 | Canola | nucleus | 31.08 | 35.94 |
| CDX96875 | Canola | nucleus | 29.05 | 34.13 |
| KRH50534 | Soybean | nucleus | 27.03 | 33.61 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 25.0 | 29.6 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 29.05 | 27.22 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 29.05 | 27.22 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 28.38 | 26.92 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 28.38 | 26.75 |
| EES02656 | Sorghum | cytosol | 25.0 | 23.27 |
| Os10t0330000-01 | Rice | plasma membrane | 25.0 | 22.42 |
| Zm00001d008397_P001 | Maize | extracellular | 24.32 | 21.82 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 27.7 | 21.47 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 29.05 | 13.19 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 26.35 | 13.18 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 27.7 | 11.95 |
| Solyc05g012570.2.1 | Tomato | nucleus | 29.73 | 11.0 |
| OQU93026 | Sorghum | nucleus | 29.05 | 10.31 |
| Zm00001d028024_P001 | Maize | extracellular | 28.38 | 9.61 |
| Os03t0210600-01 | Rice | plasma membrane | 18.24 | 9.0 |
| PGSC0003DMT400072972 | Potato | cytosol | 29.05 | 7.8 |
Protein Annotations
| EnsemblPlants:CDY53944 | EnsemblPlantsGene:GSBRNA2T00011738001 | PANTHER:PTHR35098 | ProteinID:CDY53944 | ProteinID:CDY53944.1 | SEG:seg |
| UniParc:UPI0004EED031 | UniProt:A0A078IX27 | MapMan:35.1 | : | : | : |
Description
BnaA02g36940DBnaA02g36940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IX27]
Coordinates
chrLK033254:-:33681..34535
Molecular Weight (calculated)
15781.5 Da
IEP (calculated)
9.772
GRAVY (calculated)
-0.833
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLTDQLKK KFSDKKPEIQ NRRRTTTKTN PVMPVQQLIA DIGQLPTLSS WLLDKAKVAG ATADILDAAG RYGKFDEKSG VGQYLEKAEN YLNKYETSHS
101: HSSSGGSHGG GSHGGGAGEP AGKKGDEKSG SGSHGFGDYA KMAQGFMK
101: HSSSGGSHGG GSHGGGAGEP AGKKGDEKSG SGSHGFGDYA KMAQGFMK
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.