Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024775.1-P | Field mustard | nucleus | 98.87 | 98.87 |
| CDY45164 | Canola | nucleus | 98.31 | 98.31 |
| AT2G03440.1 | Thale cress | nucleus | 81.36 | 77.01 |
| CDY37195 | Canola | nucleus | 68.36 | 70.35 |
| CDY34553 | Canola | nucleus | 46.89 | 66.94 |
| CDY53944 | Canola | cytosol | 52.54 | 62.84 |
| CDY34552 | Canola | nucleus | 36.72 | 50.78 |
| CDX96875 | Canola | nucleus | 35.03 | 49.21 |
| KRH50534 | Soybean | nucleus | 28.81 | 42.86 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 28.25 | 40.0 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 28.81 | 32.48 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 28.81 | 32.28 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 28.81 | 32.28 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 28.25 | 32.05 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 33.33 | 30.89 |
| Os10t0330000-01 | Rice | plasma membrane | 25.99 | 27.88 |
| EES02656 | Sorghum | cytosol | 24.29 | 27.04 |
| Zm00001d008397_P001 | Maize | extracellular | 24.86 | 26.67 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 29.94 | 17.91 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 31.07 | 16.87 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 30.51 | 15.74 |
| Solyc05g012570.2.1 | Tomato | nucleus | 33.9 | 15.0 |
| OQU93026 | Sorghum | nucleus | 29.38 | 12.47 |
| Zm00001d028024_P001 | Maize | extracellular | 28.25 | 11.44 |
| PGSC0003DMT400072972 | Potato | cytosol | 32.2 | 10.34 |
| Os03t0210600-01 | Rice | plasma membrane | 15.25 | 9.0 |
Protein Annotations
| EnsemblPlants:CDY02995 | EnsemblPlantsGene:GSBRNA2T00115296001 | PANTHER:PTHR35098 | ProteinID:CDY02995 | ProteinID:CDY02995.1 | SEG:seg |
| UniParc:UPI0004EBACA4 | MapMan:35.1 | : | : | : | : |
Description
BnaC07g22320D
Coordinates
chrLK031939:+:169783..173513
Molecular Weight (calculated)
18441.2 Da
IEP (calculated)
8.038
GRAVY (calculated)
-0.934
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLTDQVKK KFSDKKPETS DPDPNHNNNR PGHTVPTHKP ASSSDPTMHK PATNAELMAS AKIVAEAAQA ASRNETDKLD KAKVAGATAD ILDAAQRYGK
101: LDEKSGVGQY LEKAENFLHK YESSHSHSSG GAGSHGGVSG SHGGGAGGPA VKKEDEKSGG GSHGLGDYAK MAQGFMK
101: LDEKSGVGQY LEKAENFLHK YESSHSHSSG GAGSHGGVSG SHGGGAGGPA VKKEDEKSGG GSHGLGDYAK MAQGFMK
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.