Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50534 | Soybean | nucleus | 76.8 | 80.67 |
| CDY34553 | Canola | nucleus | 39.2 | 39.52 |
| Bra016718.1-P | Field mustard | nucleus | 32.0 | 36.36 |
| Bra016719.1-P | Field mustard | nucleus | 42.4 | 33.97 |
| CDY34552 | Canola | nucleus | 34.4 | 33.59 |
| AT1G13930.1 | Thale cress | nucleus | 39.2 | 31.61 |
| CDX96875 | Canola | nucleus | 30.4 | 30.16 |
| Bra026551.1-P | Field mustard | nucleus | 39.2 | 29.34 |
| CDY37195 | Canola | nucleus | 40.0 | 29.07 |
| AT2G03440.1 | Thale cress | nucleus | 43.2 | 28.88 |
| Bra024775.1-P | Field mustard | nucleus | 40.0 | 28.25 |
| CDY02995 | Canola | nucleus | 40.0 | 28.25 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 35.2 | 28.03 |
| Zm00001d008397_P001 | Maize | extracellular | 36.8 | 27.88 |
| Os10t0330000-01 | Rice | plasma membrane | 36.8 | 27.88 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 35.2 | 27.85 |
| CDY45164 | Canola | nucleus | 39.2 | 27.68 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 34.4 | 27.22 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 33.6 | 26.92 |
| EES02656 | Sorghum | cytosol | 32.0 | 25.16 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 38.4 | 25.13 |
| CDY53944 | Canola | cytosol | 29.6 | 25.0 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 45.6 | 19.26 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 46.4 | 17.79 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 43.2 | 15.74 |
| Solyc05g012570.2.1 | Tomato | nucleus | 41.6 | 13.0 |
| OQU93026 | Sorghum | nucleus | 42.4 | 12.71 |
| Zm00001d028024_P001 | Maize | extracellular | 44.0 | 12.59 |
| PGSC0003DMT400072972 | Potato | cytosol | 42.4 | 9.62 |
| Os03t0210600-01 | Rice | plasma membrane | 17.6 | 7.33 |
Protein Annotations
| EMBL:ACUP02012214 | EnsemblPlants:KRG89504 | EnsemblPlantsGene:GLYMA_20G027200 | EntrezGene:100804187 | ncoils:Coil | PANTHER:PTHR35098 |
| ProteinID:KRG89504 | ProteinID:KRG89504.1 | SEG:seg | UniParc:UPI000233DA2F | UniProt:I1NDJ4 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr20:-:3007481..3008273
Molecular Weight (calculated)
12522.4 Da
IEP (calculated)
4.911
GRAVY (calculated)
-0.596
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEESHNIK PPSEQSTTEL IASAKLVAEA AQSALKRESD KVDKAKLADA AGDLLDAAGK YAKLDDKQGI GQYVDKAADY LHNYQGGGGG APSQPAESKG
101: EESGGGGGGG GLGGLANLAG GFFKK
101: EESGGGGGGG GLGGLANLAG GFFKK
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.