Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024775.1-P | Field mustard | nucleus | 99.44 | 99.44 |
| CDY02995 | Canola | nucleus | 98.31 | 98.31 |
| AT2G03440.1 | Thale cress | nucleus | 81.92 | 77.54 |
| CDY37195 | Canola | nucleus | 68.93 | 70.93 |
| CDY34553 | Canola | nucleus | 46.33 | 66.13 |
| CDY53944 | Canola | cytosol | 51.98 | 62.16 |
| CDY34552 | Canola | nucleus | 36.16 | 50.0 |
| CDX96875 | Canola | nucleus | 34.46 | 48.41 |
| KRH50534 | Soybean | nucleus | 28.25 | 42.02 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 27.68 | 39.2 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 28.81 | 32.48 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 28.81 | 32.28 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 28.81 | 32.28 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 28.25 | 32.05 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 33.33 | 30.89 |
| Os10t0330000-01 | Rice | plasma membrane | 25.99 | 27.88 |
| EES02656 | Sorghum | cytosol | 24.29 | 27.04 |
| Zm00001d008397_P001 | Maize | extracellular | 24.86 | 26.67 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 30.51 | 18.24 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 31.64 | 17.18 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 31.07 | 16.04 |
| Solyc05g012570.2.1 | Tomato | nucleus | 33.9 | 15.0 |
| OQU93026 | Sorghum | nucleus | 29.38 | 12.47 |
| Zm00001d028024_P001 | Maize | extracellular | 28.25 | 11.44 |
| PGSC0003DMT400072972 | Potato | cytosol | 32.2 | 10.34 |
| Os03t0210600-01 | Rice | plasma membrane | 15.25 | 9.0 |
Protein Annotations
| EnsemblPlants:CDY45164 | EnsemblPlantsGene:GSBRNA2T00081585001 | PANTHER:PTHR35098 | ProteinID:CDY45164 | ProteinID:CDY45164.1 | SEG:seg |
| UniParc:UPI0004EF2452 | UniProt:A0A078I6X4 | MapMan:35.1 | : | : | : |
Description
BnaA06g33680DBnaA06g33680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6X4]
Coordinates
chrLK032617:+:13544..14077
Molecular Weight (calculated)
18369.2 Da
IEP (calculated)
8.824
GRAVY (calculated)
-0.901
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLTDQVKK KFSDKKPETS DPDPNHNNNK PGHTVPTHKP ASSSDPTMHK PATNAELMAS AKIVAEAAQA ASRNETGKLD KAKVAGATAD ILDAAQRYGK
101: LDEKSGVGQY LEKAENFLHK YESSHSHSSG GAGSHGGVSG SHGGGAGAPA VKKEDEKSGG GSHGLGDYAK MAQGFMK
101: LDEKSGVGQY LEKAENFLHK YESSHSHSSG GAGSHGGVSG SHGGGAGAPA VKKEDEKSGG GSHGLGDYAK MAQGFMK
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.