Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
22313117
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g012570.2.1 | Tomato | nucleus | 38.84 | 53.5 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 9.62 | 42.4 |
| KRH50534 | Soybean | nucleus | 9.07 | 42.02 |
| PGSC0003DMT400086072 | Potato | cytosol | 11.98 | 39.29 |
| CDY34553 | Canola | nucleus | 8.53 | 37.9 |
| Bra026551.1-P | Field mustard | nucleus | 9.98 | 32.93 |
| AT1G13930.1 | Thale cress | nucleus | 9.07 | 32.26 |
| Bra024775.1-P | Field mustard | nucleus | 10.34 | 32.2 |
| CDY02995 | Canola | nucleus | 10.34 | 32.2 |
| CDY45164 | Canola | nucleus | 10.34 | 32.2 |
| Bra016719.1-P | Field mustard | nucleus | 9.07 | 32.05 |
| CDY37195 | Canola | nucleus | 9.98 | 31.98 |
| CDY34552 | Canola | nucleus | 7.26 | 31.25 |
| AT2G03440.1 | Thale cress | nucleus | 10.34 | 30.48 |
| Bra016718.1-P | Field mustard | nucleus | 5.99 | 30.0 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 10.16 | 29.32 |
| CDY53944 | Canola | cytosol | 7.8 | 29.05 |
| Os10t0330000-01 | Rice | plasma membrane | 8.35 | 27.88 |
| CDX96875 | Canola | nucleus | 6.35 | 27.78 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 7.8 | 27.39 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 7.62 | 26.92 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 14.34 | 26.69 |
| Zm00001d008397_P001 | Maize | extracellular | 7.99 | 26.67 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 7.62 | 26.58 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 7.62 | 26.58 |
| EES02656 | Sorghum | cytosol | 7.62 | 26.42 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 15.06 | 25.46 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 13.07 | 20.99 |
| OQU93026 | Sorghum | nucleus | 14.88 | 19.66 |
| Zm00001d028024_P001 | Maize | extracellular | 15.43 | 19.45 |
| Os03t0210600-01 | Rice | plasma membrane | 10.34 | 19.0 |
Protein Annotations
| EMBL:JX576288 | EnsemblPlants:PGSC0003DMT400072972 | EnsemblPlantsGene:PGSC0003DMG400028384 | PANTHER:PTHR35098 | PANTHER:PTHR35098:SF1 | PGSC:PGSC0003DMG400028384 |
| ProteinID:AFW90644 | ProteinID:AFW90644.1 | SEG:seg | UniParc:UPI0002959CC4 | UniProt:M1CRA9 | MapMan:35.2 |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400028384]
Coordinates
chr5:+:311394..315497
Molecular Weight (calculated)
57878.8 Da
IEP (calculated)
6.313
GRAVY (calculated)
-1.264
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFLSSLAKS AGAGDEKKAG GEESGSTTEL FASAKVLADA AQSQFNKDSG KVDNKKVAEA AADVLDAAQK YGKLDETQGI GQYVEKAETY LHQAPAAAPV
101: AEEAKAKAPA PAPESAPASE PAPAPVVEED KEEEKKSGGA DYLKMAGDFL GKKPCGAGRG GGKTAAGSAG RGAPNPNEHK QPTTSELMAS AKLVAAAAQS
201: QLGGGGEGKP KEELDTGKLA GAAADLLAAA THYGKLGDDG IGKYIGQAED YLHGYELKNV KPNKAGAGAS VGSKKSTSSN AESKNSSESL PRGNARDDDE
301: RGEHARKEKK IPSKKQSGDN YGHDREEGDE DHARGHDEHM PKGKEMPKKQ VGDRHGHEHE RSKEGDDHSG DEYGEHTRKG KGMPRKQSGD RDNRERSKED
401: DDHSRSGRGE SKGMPTKKSG GHGHDEHSDE DDSRSGGGYG DYIKKAQGMI KKKSGDDDNP EKGDGESGGG YGDYIKKAQG FLKKKSDNGD GSPRGEDGDS
501: GGGMGGVMKM AQGMFKKDSD DRDGNRSPTK HSNEEDGNKT DYLKMAGSFF K
101: AEEAKAKAPA PAPESAPASE PAPAPVVEED KEEEKKSGGA DYLKMAGDFL GKKPCGAGRG GGKTAAGSAG RGAPNPNEHK QPTTSELMAS AKLVAAAAQS
201: QLGGGGEGKP KEELDTGKLA GAAADLLAAA THYGKLGDDG IGKYIGQAED YLHGYELKNV KPNKAGAGAS VGSKKSTSSN AESKNSSESL PRGNARDDDE
301: RGEHARKEKK IPSKKQSGDN YGHDREEGDE DHARGHDEHM PKGKEMPKKQ VGDRHGHEHE RSKEGDDHSG DEYGEHTRKG KGMPRKQSGD RDNRERSKED
401: DDHSRSGRGE SKGMPTKKSG GHGHDEHSDE DDSRSGGGYG DYIKKAQGMI KKKSGDDDNP EKGDGESGGG YGDYIKKAQG FLKKKSDNGD GSPRGEDGDS
501: GGGMGGVMKM AQGMFKKDSD DRDGNRSPTK HSNEEDGNKT DYLKMAGSFF K
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.