Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0330000-01 | Rice | plasma membrane | 60.0 | 60.0 |
| EES02656 | Sorghum | cytosol | 56.36 | 58.49 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 53.94 | 56.69 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 53.33 | 56.41 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 53.33 | 55.7 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 53.33 | 55.7 |
| KRH50534 | Soybean | nucleus | 27.27 | 37.82 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 27.88 | 36.8 |
| CDY34553 | Canola | nucleus | 26.06 | 34.68 |
| Bra016718.1-P | Field mustard | nucleus | 21.21 | 31.82 |
| Bra016719.1-P | Field mustard | nucleus | 28.48 | 30.13 |
| AT1G13930.1 | Thale cress | nucleus | 27.88 | 29.68 |
| CDX96875 | Canola | nucleus | 21.82 | 28.57 |
| CDY34552 | Canola | nucleus | 21.82 | 28.12 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 29.7 | 25.65 |
| CDY45164 | Canola | nucleus | 26.67 | 24.86 |
| CDY02995 | Canola | nucleus | 26.67 | 24.86 |
| Bra024775.1-P | Field mustard | nucleus | 26.67 | 24.86 |
| Bra026551.1-P | Field mustard | nucleus | 24.85 | 24.55 |
| CDY53944 | Canola | cytosol | 21.82 | 24.32 |
| AT2G03440.1 | Thale cress | nucleus | 27.27 | 24.06 |
| CDY37195 | Canola | nucleus | 24.85 | 23.84 |
| Zm00001d028024_P001 | Maize | extracellular | 34.55 | 13.04 |
| Solyc05g012570.2.1 | Tomato | nucleus | 29.09 | 12.0 |
| PGSC0003DMT400072972 | Potato | cytosol | 26.67 | 7.99 |
Protein Annotations
| EMBL:BT043345 | EnsemblPlants:Zm00001d008397_P001 | EnsemblPlants:Zm00001d008397_T001 | EnsemblPlantsGene:Zm00001d008397 | EntrezGene:100278648 | PANTHER:PTHR35098 |
| PANTHER:PTHR35098:SF2 | ProteinID:AQK89740.1 | SEG:seg | UniParc:UPI00017B7A65 | UniProt:B4G1V7 | MapMan:35.2 |
Description
Nodulin-related protein 1
Coordinates
chr8:+:7232820..7233317
Molecular Weight (calculated)
16367.9 Da
IEP (calculated)
4.441
GRAVY (calculated)
-0.422
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGKSSSGG DLFSSGKLVA GAAVSVFQQK SVENVDKQEV AGAAAELLHA ASAYGKLDDK PAGQYVEKAE GYLKEFSAGH ATEQEQPAAA AGDDAAPKSP
101: APEAPKEPAA VPAPAAEEGS KSSEGFGLGD VMKGAEQLVG GNKQGGGEES AGGGGLFKMA QGFLK
101: APEAPKEPAA VPAPAAEEGS KSSEGFGLGD VMKGAEQLVG GNKQGGGEES AGGGGLFKMA QGFLK
001: MNFISDQVKK LSSSTPEEPD HNKPVEGTET ATRPATNAEL MASAKVVAEA AQAAARNESD KLDKGKVAGA SADILDAAEK YGKFDEKSST GQYLDKAEKY
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
Arabidopsis Description
At1g13930/F16A14.27 [Source:UniProtKB/TrEMBL;Acc:Q9XI93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.