Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008397_P001 | Maize | extracellular | 58.49 | 56.36 |
| Os10t0330000-01 | Rice | plasma membrane | 53.46 | 51.52 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 48.43 | 49.36 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 48.43 | 48.73 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 48.43 | 48.73 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 47.8 | 48.41 |
| CDY34553 | Canola | nucleus | 27.04 | 34.68 |
| Bra016718.1-P | Field mustard | nucleus | 23.9 | 34.55 |
| KRH50534 | Soybean | nucleus | 25.79 | 34.45 |
| Bra016719.1-P | Field mustard | nucleus | 32.08 | 32.69 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 25.16 | 32.0 |
| AT1G13930.1 | Thale cress | nucleus | 30.82 | 31.61 |
| CDX96875 | Canola | nucleus | 24.53 | 30.95 |
| CDY34552 | Canola | nucleus | 24.53 | 30.47 |
| Bra026551.1-P | Field mustard | nucleus | 27.67 | 26.35 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 30.82 | 25.65 |
| CDY37195 | Canola | nucleus | 27.67 | 25.58 |
| CDY53944 | Canola | cytosol | 23.27 | 25.0 |
| CDY45164 | Canola | nucleus | 27.04 | 24.29 |
| CDY02995 | Canola | nucleus | 27.04 | 24.29 |
| Bra024775.1-P | Field mustard | nucleus | 27.04 | 24.29 |
| AT2G03440.1 | Thale cress | nucleus | 27.67 | 23.53 |
| OQU93026 | Sorghum | nucleus | 37.11 | 14.15 |
| Solyc05g012570.2.1 | Tomato | nucleus | 29.56 | 11.75 |
| PGSC0003DMT400072972 | Potato | cytosol | 26.42 | 7.62 |
Protein Annotations
| EnsemblPlants:EES02656 | EnsemblPlantsGene:SORBI_3003G106500 | EntrezGene:8085051 | PANTHER:PTHR35098 | PANTHER:PTHR35098:SF2 | ProteinID:EES02656 |
| ProteinID:EES02656.1 | RefSeq:XP_002457536.1 | SEG:seg | unigene:Sbi.3312 | UniParc:UPI0001A84D9F | UniProt:C5XF29 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:9647563..9648461
Molecular Weight (calculated)
16052.6 Da
IEP (calculated)
4.595
GRAVY (calculated)
-0.496
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGKSSGDL FSSGKLVAEA AASAFQQKSV ENVDKKEVAG AAAEILHAAS TYGKFEDKPA GQYIEKAEGY LKEFSAGGHA AEPAAAGDAA PPKPAEEAPK
101: EKEPVPAPAP KEEGGKSSSE GFGLGDVVKG AEQLVEKQGG AGEESAAGGL FKMAQGFLK
101: EKEPVPAPAP KEEGGKSSSE GFGLGDVVKG AEQLVEKQGG AGEESAAGGL FKMAQGFLK
001: MNFISDQVKK LSSSTPEEPD HNKPVEGTET ATRPATNAEL MASAKVVAEA AQAAARNESD KLDKGKVAGA SADILDAAEK YGKFDEKSST GQYLDKAEKY
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
Arabidopsis Description
At1g13930/F16A14.27 [Source:UniProtKB/TrEMBL;Acc:Q9XI93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.