Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G156500.1 | Wheat | nucleus | 97.47 | 97.47 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 94.3 | 95.51 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 89.87 | 90.45 |
| Os10t0330000-01 | Rice | plasma membrane | 56.96 | 54.55 |
| Zm00001d008397_P001 | Maize | extracellular | 55.7 | 53.33 |
| EES02656 | Sorghum | cytosol | 48.73 | 48.43 |
| CDY34553 | Canola | nucleus | 32.91 | 41.94 |
| Bra016718.1-P | Field mustard | nucleus | 25.95 | 37.27 |
| Bra016719.1-P | Field mustard | nucleus | 36.08 | 36.54 |
| KRH50534 | Soybean | nucleus | 27.22 | 36.13 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 27.85 | 35.2 |
| AT1G13930.1 | Thale cress | nucleus | 33.54 | 34.19 |
| CDX96875 | Canola | nucleus | 26.58 | 33.33 |
| CDY34552 | Canola | nucleus | 25.95 | 32.03 |
| Bra026551.1-P | Field mustard | nucleus | 32.28 | 30.54 |
| CDY37195 | Canola | nucleus | 31.65 | 29.07 |
| CDY53944 | Canola | cytosol | 27.22 | 29.05 |
| CDY45164 | Canola | nucleus | 32.28 | 28.81 |
| CDY02995 | Canola | nucleus | 32.28 | 28.81 |
| Bra024775.1-P | Field mustard | nucleus | 32.28 | 28.81 |
| AT2G03440.1 | Thale cress | nucleus | 31.65 | 26.74 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 29.75 | 24.61 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 31.01 | 14.29 |
| Solyc05g012570.2.1 | Tomato | nucleus | 29.11 | 11.5 |
| PGSC0003DMT400072972 | Potato | cytosol | 26.58 | 7.62 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G175900.1 | EnsemblPlantsGene:TraesCS3B01G175900 | PANTHER:PTHR35098 | PANTHER:PTHR35098:SF2 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3B:-:177968194..177968937
Molecular Weight (calculated)
16199.8 Da
IEP (calculated)
4.622
GRAVY (calculated)
-0.767
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGEKNSSGD LMSSSKLVAE AAKTAYEKKS VEGIDKEKVA AASADILDSA AKYGKLEDKP VGQYLEKAEG YLKQYSSGGT EKEKTDAPAA ADAPKPDAPK
101: EPAPAPAPAA EEEKASGGFG LDDVMKGAAS LSGKKSGEDE KESGGGGGFM KMAQGFMK
101: EPAPAPAPAA EEEKASGGFG LDDVMKGAAS LSGKKSGEDE KESGGGGGFM KMAQGFMK
001: MNFISDQVKK LSSSTPEEPD HNKPVEGTET ATRPATNAEL MASAKVVAEA AQAAARNESD KLDKGKVAGA SADILDAAEK YGKFDEKSST GQYLDKAEKY
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
Arabidopsis Description
At1g13930/F16A14.27 [Source:UniProtKB/TrEMBL;Acc:Q9XI93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.