Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50534 | Soybean | nucleus | 12.75 | 42.86 |
| Solyc04g005480.1.1 | Tomato | extracellular | 17.75 | 41.76 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 13.0 | 41.6 |
| CDY34553 | Canola | nucleus | 12.75 | 41.13 |
| PGSC0003DMT400072972 | Potato | cytosol | 53.5 | 38.84 |
| Bra016719.1-P | Field mustard | nucleus | 13.75 | 35.26 |
| CDY34552 | Canola | nucleus | 11.0 | 34.38 |
| Bra026551.1-P | Field mustard | nucleus | 14.25 | 34.13 |
| Bra024775.1-P | Field mustard | nucleus | 15.0 | 33.9 |
| CDY02995 | Canola | nucleus | 15.0 | 33.9 |
| CDY45164 | Canola | nucleus | 15.0 | 33.9 |
| CDY37195 | Canola | nucleus | 14.5 | 33.72 |
| AT1G13930.1 | Thale cress | nucleus | 12.75 | 32.9 |
| Bra016718.1-P | Field mustard | nucleus | 9.0 | 32.73 |
| AT2G03440.1 | Thale cress | nucleus | 14.75 | 31.55 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 14.5 | 30.37 |
| CDX96875 | Canola | nucleus | 9.5 | 30.16 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 11.75 | 29.94 |
| CDY53944 | Canola | cytosol | 11.0 | 29.73 |
| EES02656 | Sorghum | cytosol | 11.75 | 29.56 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 11.5 | 29.11 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 11.5 | 29.11 |
| Zm00001d008397_P001 | Maize | extracellular | 12.0 | 29.09 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 11.25 | 28.85 |
| Os10t0330000-01 | Rice | plasma membrane | 11.75 | 28.48 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 18.0 | 24.32 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 18.25 | 22.39 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 16.75 | 19.53 |
| OQU93026 | Sorghum | nucleus | 19.25 | 18.47 |
| Zm00001d028024_P001 | Maize | extracellular | 19.75 | 18.08 |
| Os03t0210600-01 | Rice | plasma membrane | 11.25 | 15.0 |
Protein Annotations
| EnsemblPlants:Solyc05g012570.2.1 | EnsemblPlantsGene:Solyc05g012570.2 | PANTHER:PTHR35098 | PANTHER:PTHR35098:SF1 | SEG:seg | UniParc:UPI00027658B4 |
| UniProt:K4BXX9 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:5796042..5797877
Molecular Weight (calculated)
42036.3 Da
IEP (calculated)
6.318
GRAVY (calculated)
-1.436
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALFAKGKE FLNSKDKDDE KETPNRSERT KHHDDVDDSD DHPQRKTAGK SGGGGGRGGG WSDSEGDDER PAGAGRGGGK AAAGTGAQNP NEHKQPTTSE
101: LMASAKLVAA AAQSQLGGGG EGKPKEELDT GKLAGAAADI LAAASHYGKL GDDGIGKYIG QAEDYLHGYE LKNSKPNKSG SGAGADAESG SGTGAASKKS
201: TSSNAEHKNS SESHPRGNTR DDDDHDDERR EHATKEKKMA SKKPSGDNQS HDREEVGRGM PKKQVGDDHS ADEHTMKGKE MPQKQSGGRE RSKEDDDDPR
301: SGRGESEGIA KKKPVGHGHD EDDSRSGGGY GEYIKKAQGF LNKKSDGGNG SPKADGDSGG GVMKMAQGLF KKDSDDRSPN KHDEDGNKTD YLKMAGSFFK
101: LMASAKLVAA AAQSQLGGGG EGKPKEELDT GKLAGAAADI LAAASHYGKL GDDGIGKYIG QAEDYLHGYE LKNSKPNKSG SGAGADAESG SGTGAASKKS
201: TSSNAEHKNS SESHPRGNTR DDDDHDDERR EHATKEKKMA SKKPSGDNQS HDREEVGRGM PKKQVGDDHS ADEHTMKGKE MPQKQSGGRE RSKEDDDDPR
301: SGRGESEGIA KKKPVGHGHD EDDSRSGGGY GEYIKKAQGF LNKKSDGGNG SPKADGDSGG GVMKMAQGLF KKDSDDRSPN KHDEDGNKTD YLKMAGSFFK
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.