Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086072 | Potato | cytosol | 89.41 | 90.48 |
| Solyc05g012570.2.1 | Tomato | nucleus | 41.76 | 17.75 |
Protein Annotations
| EnsemblPlants:Solyc04g005480.1.1 | EnsemblPlantsGene:Solyc04g005480.1 | PANTHER:PTHR35098 | PANTHER:PTHR35098:SF1 | SEG:seg | UniParc:UPI00027661D7 |
| UniProt:K4BNF4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:323321..323833
Molecular Weight (calculated)
17916.7 Da
IEP (calculated)
9.796
GRAVY (calculated)
-0.920
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPTRAKSTS GSGHSSTHKP NSHPKPSKSE LMSSAKLVAD AAKAKLHHDP KQFEKSELAG AAADLLNAAS QYGKLEETGI GKFVGKAETY LHKYETSHHS
101: TTTATAAATA HTQSSGHTSG GKHEKSGSGY GEYIKMAEGL LKKDSDGSQS SESGKKGDYL KMAGDFLKKH
101: TTTATAAATA HTQSSGHTSG GKHEKSGSGY GEYIKMAEGL LKKDSDGSQS SESGKKGDYL KMAGDFLKKH
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.