Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008397_P001 | Maize | extracellular | 60.0 | 60.0 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 55.15 | 58.33 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 55.15 | 57.96 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 55.15 | 57.59 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 54.55 | 56.96 |
| EES02656 | Sorghum | cytosol | 51.52 | 53.46 |
| CDY34553 | Canola | nucleus | 29.09 | 38.71 |
| KRH50534 | Soybean | nucleus | 26.67 | 36.97 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 27.88 | 36.8 |
| Bra016719.1-P | Field mustard | nucleus | 33.33 | 35.26 |
| Bra016718.1-P | Field mustard | nucleus | 23.03 | 34.55 |
| CDY34552 | Canola | nucleus | 24.85 | 32.03 |
| AT1G13930.1 | Thale cress | nucleus | 29.7 | 31.61 |
| CDX96875 | Canola | nucleus | 21.82 | 28.57 |
| Bra026551.1-P | Field mustard | nucleus | 27.27 | 26.95 |
| CDY45164 | Canola | nucleus | 27.88 | 25.99 |
| CDY02995 | Canola | nucleus | 27.88 | 25.99 |
| Bra024775.1-P | Field mustard | nucleus | 27.88 | 25.99 |
| CDY37195 | Canola | nucleus | 26.67 | 25.58 |
| CDY53944 | Canola | cytosol | 22.42 | 25.0 |
| AT2G03440.1 | Thale cress | nucleus | 27.88 | 24.6 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 27.27 | 23.56 |
| Solyc05g012570.2.1 | Tomato | nucleus | 28.48 | 11.75 |
| Os03t0210600-01 | Rice | plasma membrane | 17.58 | 9.67 |
| PGSC0003DMT400072972 | Potato | cytosol | 27.88 | 8.35 |
Protein Annotations
| EMBL:AK070152 | EMBL:AK071458 | EMBL:AK104034 | EnsemblPlants:Os10t0330000-01 | EnsemblPlantsGene:Os10g0330000 | EntrezGene:4348334 |
| PANTHER:PTHR35098 | PANTHER:PTHR35098:SF2 | ProteinID:AAL31072.1 | ProteinID:AAN04155.1 | ProteinID:AAP53020.1 | ProteinID:BAF26277.1 |
| ProteinID:BAT10356.1 | RefSeq:XP_015612806.1 | SEG:seg | UniParc:UPI00000ABD6C | UniProt:Q7G649 | MapMan:35.2 |
Description
Conserved hypothetical protein. (Os10t0330000-01)
Coordinates
chr10:+:9315531..9316279
Molecular Weight (calculated)
16523.2 Da
IEP (calculated)
4.416
GRAVY (calculated)
-0.556
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEENKSGSG DLMASGKVVA EATMSVFQQK SVEGVDKKEV AGAAADLLHS ASTYGKLDDK PVGQYIDKAE GYLKDFSSGS GGAAPPPPAA GDAAAPKPAA
101: EEPPKEPAPA EKEEGKPPSS SEGFGLDDVM KGAESLMEKK GGGEESAGSG GAAGGLFKMA QGFMK
101: EEPPKEPAPA EKEEGKPPSS SEGFGLDDVM KGAESLMEKK GGGEESAGSG GAAGGLFKMA QGFMK
001: MNFISDQVKK LSSSTPEEPD HNKPVEGTET ATRPATNAEL MASAKVVAEA AQAAARNESD KLDKGKVAGA SADILDAAEK YGKFDEKSST GQYLDKAEKY
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
Arabidopsis Description
At1g13930/F16A14.27 [Source:UniProtKB/TrEMBL;Acc:Q9XI93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.