Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34553 | Canola | nucleus | 68.39 | 85.48 |
| Bra016719.1-P | Field mustard | nucleus | 81.29 | 80.77 |
| CDY34552 | Canola | nucleus | 57.42 | 69.53 |
| CDX96875 | Canola | nucleus | 52.9 | 65.08 |
| Bra016718.1-P | Field mustard | nucleus | 44.52 | 62.73 |
| AT2G03440.1 | Thale cress | nucleus | 56.13 | 46.52 |
| KRH50534 | Soybean | nucleus | 33.55 | 43.7 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 31.61 | 39.2 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 34.19 | 33.54 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 33.55 | 33.33 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 33.55 | 33.12 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 33.55 | 32.91 |
| EES02656 | Sorghum | cytosol | 31.61 | 30.82 |
| Os10t0330000-01 | Rice | plasma membrane | 31.61 | 29.7 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 36.13 | 29.32 |
| Zm00001d008397_P001 | Maize | extracellular | 29.68 | 27.88 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 30.32 | 15.88 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 30.32 | 14.42 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 30.97 | 13.99 |
| Solyc05g012570.2.1 | Tomato | nucleus | 32.9 | 12.75 |
| OQU93026 | Sorghum | nucleus | 30.32 | 11.27 |
| Zm00001d028024_P001 | Maize | extracellular | 30.32 | 10.76 |
| PGSC0003DMT400072972 | Potato | cytosol | 32.26 | 9.07 |
| Os03t0210600-01 | Rice | plasma membrane | 14.84 | 7.67 |
Protein Annotations
| MapMan:35.1 | EntrezGene:837953 | UniProt:A0A178W8F9 | ProteinID:AAD39279.1 | ProteinID:AAF79399.1 | ProteinID:AEE29084.1 |
| ProteinID:AEE29085.1 | ProteinID:AEE29086.1 | ArrayExpress:AT1G13930 | EnsemblPlantsGene:AT1G13930 | RefSeq:AT1G13930 | TAIR:AT1G13930 |
| RefSeq:AT1G13930-TAIR-G | EnsemblPlants:AT1G13930.1 | TAIR:AT1G13930.1 | EMBL:AY045640 | EMBL:AY058230 | Unigene:At.25532 |
| GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009941 | GO:GO:0016020 | GO:GO:0046686 |
| RefSeq:NP_001184989.1 | RefSeq:NP_001184990.1 | RefSeq:NP_563934.1 | ProteinID:OAP13653.1 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005679 | PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR35098 | UniProt:Q9XI93 | UniParc:UPI00000A8F0C |
| SEG:seg | : | : | : | : | : |
Description
At1g13930/F16A14.27 [Source:UniProtKB/TrEMBL;Acc:Q9XI93]
Coordinates
chr1:+:4760957..4761869
Molecular Weight (calculated)
16164.4 Da
IEP (calculated)
4.552
GRAVY (calculated)
-0.883
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFISDQVKK LSSSTPEEPD HNKPVEGTET ATRPATNAEL MASAKVVAEA AQAAARNESD KLDKGKVAGA SADILDAAEK YGKFDEKSST GQYLDKAEKY
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
101: LNDYESSHST GAGGPPPPTS QAEPASQPEP AAKKDDEESG GGLGGYAKMA QGFLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.