Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
24265272
nucleus: 24265272 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G156500.1 | Wheat | nucleus | 96.79 | 95.57 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 95.51 | 94.3 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 87.82 | 87.26 |
| Os10t0330000-01 | Rice | plasma membrane | 58.33 | 55.15 |
| Zm00001d008397_P001 | Maize | extracellular | 56.41 | 53.33 |
| EES02656 | Sorghum | cytosol | 49.36 | 48.43 |
| CDY34553 | Canola | nucleus | 32.69 | 41.13 |
| Bra016718.1-P | Field mustard | nucleus | 25.64 | 36.36 |
| Bra016719.1-P | Field mustard | nucleus | 35.9 | 35.9 |
| KRH50534 | Soybean | nucleus | 26.92 | 35.29 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 26.92 | 33.6 |
| AT1G13930.1 | Thale cress | nucleus | 33.33 | 33.55 |
| CDX96875 | Canola | nucleus | 26.28 | 32.54 |
| CDY34552 | Canola | nucleus | 25.0 | 30.47 |
| Bra026551.1-P | Field mustard | nucleus | 32.05 | 29.94 |
| CDY37195 | Canola | nucleus | 31.41 | 28.49 |
| CDY53944 | Canola | cytosol | 26.92 | 28.38 |
| CDY45164 | Canola | nucleus | 32.05 | 28.25 |
| CDY02995 | Canola | nucleus | 32.05 | 28.25 |
| Bra024775.1-P | Field mustard | nucleus | 32.05 | 28.25 |
| AT2G03440.1 | Thale cress | nucleus | 31.41 | 26.2 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 29.49 | 24.08 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 30.13 | 15.88 |
| Solyc05g012570.2.1 | Tomato | nucleus | 28.85 | 11.25 |
| PGSC0003DMT400072972 | Potato | cytosol | 26.92 | 7.62 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G148700.1 | EnsemblPlantsGene:TraesCS3A01G148700 | PANTHER:PTHR35098 | PANTHER:PTHR35098:SF2 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3A:-:131458540..131459010
Molecular Weight (calculated)
16095.7 Da
IEP (calculated)
4.486
GRAVY (calculated)
-0.804
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGEKNSSGD LMSSSKLVAE AAKTAYEQKS VEGIDKEKVA GASAEMLDSA AKYGKLEDKP VGQYLEKAEG YLKQYSSGGT EKEKTDAPAA ADAPKPDAPK
101: EAAPAPAAEE EKASDGFGLD DVMKGAASLS GKKSGEEEKE SGGGGGFMKM AQGFMK
101: EAAPAPAAEE EKASDGFGLD DVMKGAASLS GKKSGEEEKE SGGGGGFMKM AQGFMK
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.