Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37195 | Canola | nucleus | 94.01 | 91.28 |
| CDY53944 | Canola | cytosol | 68.26 | 77.03 |
| Bra024775.1-P | Field mustard | nucleus | 75.45 | 71.19 |
| AT2G03440.1 | Thale cress | nucleus | 74.85 | 66.84 |
| Bra016719.1-P | Field mustard | nucleus | 55.69 | 59.62 |
| Bra016718.1-P | Field mustard | nucleus | 33.53 | 50.91 |
| KRH50534 | Soybean | nucleus | 29.34 | 41.18 |
| KRG89504 | Soybean | cytosol, mitochondrion, nucleus | 29.34 | 39.2 |
| TraesCS3D01G156500.1 | Wheat | nucleus | 30.54 | 32.28 |
| TraesCS3B01G175900.1 | Wheat | nucleus | 30.54 | 32.28 |
| TraesCS3A01G148700.1 | Wheat | nucleus | 29.94 | 32.05 |
| HORVU3Hr1G030150.1 | Barley | nucleus | 29.94 | 31.85 |
| VIT_01s0011g00830.t01 | Wine grape | nucleus | 34.13 | 29.84 |
| EES02656 | Sorghum | cytosol | 26.35 | 27.67 |
| Os10t0330000-01 | Rice | plasma membrane | 26.95 | 27.27 |
| Zm00001d008397_P001 | Maize | extracellular | 24.55 | 24.85 |
| TraesCS4A01G052500.1 | Wheat | nucleus | 31.14 | 17.57 |
| TraesCS4D01G251800.1 | Wheat | nucleus | 32.93 | 16.87 |
| TraesCS4B01G251800.2 | Wheat | nucleus | 32.34 | 15.74 |
| Solyc05g012570.2.1 | Tomato | nucleus | 34.13 | 14.25 |
| OQU93026 | Sorghum | nucleus | 31.74 | 12.71 |
| Zm00001d028024_P001 | Maize | extracellular | 30.54 | 11.67 |
| PGSC0003DMT400072972 | Potato | cytosol | 32.93 | 9.98 |
| Os03t0210600-01 | Rice | plasma membrane | 16.77 | 9.33 |
Protein Annotations
Description
AT2G03440 (E=2e-028) | nodulin-related
Coordinates
chrA02:+:20162417..20162920
Molecular Weight (calculated)
17374.9 Da
IEP (calculated)
9.261
GRAVY (calculated)
-0.987
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLTDQLKK KFSDKKPESS EPETNHNKNK PGHAGPTTHS GHRPATNAEL MASAKIVAEA AQAAARNETA KLDKTKVAGA TADILDAAGR YGKFDEKSGV
101: GQYLEKAESY LHKYESSHSH SSSGGSHGGG SHGGGAGEPA GKKGDEKSGS GSHGFGDYAK MAQGFMK
101: GQYLEKAESY LHKYESSHSH SSSGGSHGGG SHGGGAGEPA GKKGDEKSGS GSHGFGDYAK MAQGFMK
001: MDFFTDQVKK KFSDKKPESS DPEPNHNKNK PGHTEPTTHK PGHGEPTTHK PVSNTDPTTH RPATNAELMA SAKIVAEAAQ AAARHESDKL DKAKVAGATA
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
101: DILDAASRYG KLDEKSGVGQ YLEKAEQYLH KYETSHSHSS TGGTGSHGNV GGHGGGAGAP AAKKEDEKSG GGHGFGDYAK MAQGFMK
Arabidopsis Description
NRP1Nodulin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.