CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

cytosol 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16854	Soybean	endoplasmic reticulum	87.6	78.95
KRH62244	Soybean	endoplasmic reticulum	80.52	72.36
KRH52957	Soybean	endoplasmic reticulum	79.39	71.35
VIT_18s0001g07630.t01	Wine grape	endoplasmic reticulum	75.36	68.02
PGSC0003DMT400024163	Potato	endoplasmic reticulum	73.11	66.18
Solyc04g076380.2.1	Tomato	plastid	72.95	66.03
CDY11017	Canola	endoplasmic reticulum, plastid, vacuole	72.79	65.04
Bra019223.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	70.21	64.88
CDX92639	Canola	vacuole	72.46	64.75
CDY03447	Canola	endoplasmic reticulum	71.66	64.03
CDY34288	Canola	endoplasmic reticulum	71.5	63.88
Bra013810.1-P	Field mustard	endoplasmic reticulum	71.18	63.69
AT4G24520.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	70.85	63.58
Bra013811.1-P	Field mustard	endoplasmic reticulum	71.01	63.45
CDY70343	Canola	cytosol, endoplasmic reticulum, peroxisome	60.55	63.41
CDY34287	Canola	cytosol, endoplasmic reticulum, peroxisome	70.85	63.4
KRH19026	Soybean	mitochondrion	63.61	55.87
KRH02867	Soybean	endoplasmic reticulum	63.12	55.45
KRH46914	Soybean	cytosol, nucleus, peroxisome	14.65	25.93
KRH01775	Soybean	cytosol, mitochondrion	24.96	24.88

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:35.1	UniProt:A0A0R0L4H1
EMBL:ACUP02001213	InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase
InterPro:Flavoprotein-like_sf	EnsemblPlantsGene:GLYMA_02G214700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008254
InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039	EnsemblPlants:KRH72466	ProteinID:KRH72466	ProteinID:KRH72466.1
InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369
PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF85	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0006EDFDED	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:40079273..40088380

Molecular Weight (calculated)

69256.8 Da

IEP (calculated)

4.490

GRAVY (calculated)

-0.290

Length

621 amino acids

Sequence
(BLAST)

001: MASNSELVRT VVESALGVSV SDSVLEIFGS EQGPKPLAVP KLLVKEEEEE EEEEEDAGSG KTRVAIFFGI QTGTAEGFAK ALVEEIKARY EKTAVKVVDL
101: DDYTMDDDQY EEKLKKESVA FFIYGDGKPT DNAARFHKWF TEVKDDRGTW LQQLTYGVFG LGNQQYDHFN KIGKIVNEEL SEQGAKRLVP LGLGDDDQSI
201: EDDFVAWKES LWPELDQLLR DEDDVNTVST VYKAAIPEYR VVIHDSTVTS CNDNQLNVAN GNAVFDIHHP CRVNVAVQRE LHKFESDRSC IHLEFDISGT
301: GIIYETADNV GVFAENDDEA VEEAGKLLGQ DLDLVFSLLT DNEDGTPLGG SLPPPFLGPC TLGFVLAHYA DLLNPPRKDE YSKWLLGSQR SLLEVMAEFP
401: SAKPPLGVFF AAVAPHLQPC YYSISSSPRF SSQRVHVTCA LVCGPTPTGR IHKGVCSTWM KNAIPLEKSC DCSWAPIFIR TSNFKLPADH SVAIIMVGPG
501: TGLAPFRGFL QERLVLKEDG VQLGPALLFF GCRNRQMDFI YEDELKNFVE QGALSELIVA FSREGPEKEY VQHKMMDKGM ARDVHRTLLT IVQQQENVDP
601: SNAEAIVKKF QMDGRYLRDV W

Best Arabidopsis Sequence Match ( AT4G24520.1 )
(BLAST)

001: MTSALYASDL FKQLKSIMGT DSLSDDVVLV IATTSLALVA GFVVLLWKKT TADRSGELKP LMIPKSLMAK DEDDDLDLGS GKTRVSIFFG TQTGTAEGFA
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW

Arabidopsis Description

ATR1NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR2]
SUBAcon: [cytosol,endoplasmic reticulum,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.