Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92639 | Canola | vacuole | 89.88 | 89.5 |
| CDY03447 | Canola | endoplasmic reticulum | 89.16 | 88.78 |
| CDY11017 | Canola | endoplasmic reticulum, plastid, vacuole | 89.16 | 88.78 |
| CDY34288 | Canola | endoplasmic reticulum | 89.16 | 88.78 |
| Bra013811.1-P | Field mustard | endoplasmic reticulum | 88.73 | 88.35 |
| Bra019223.1-P | Field mustard | cytosol, endoplasmic reticulum, plastid | 85.26 | 87.8 |
| Bra013810.1-P | Field mustard | endoplasmic reticulum | 83.81 | 83.57 |
| CDY34287 | Canola | cytosol, endoplasmic reticulum, peroxisome | 83.38 | 83.14 |
| CDY70343 | Canola | cytosol, endoplasmic reticulum, peroxisome | 70.66 | 82.46 |
| Solyc04g076380.2.1 | Tomato | plastid | 74.13 | 74.78 |
| PGSC0003DMT400024163 | Potato | endoplasmic reticulum | 73.99 | 74.64 |
| KRH52957 | Soybean | endoplasmic reticulum | 73.99 | 74.1 |
| KRH62244 | Soybean | endoplasmic reticulum | 73.99 | 74.1 |
| KRH16854 | Soybean | endoplasmic reticulum | 73.41 | 73.73 |
| VIT_18s0001g07630.t01 | Wine grape | endoplasmic reticulum | 71.82 | 72.24 |
| KRH72466 | Soybean | cytosol, peroxisome, plastid | 63.58 | 70.85 |
| AT4G30210.3 | Thale cress | plastid | 63.87 | 57.11 |
| AT3G02280.2 | Thale cress | mitochondrion | 25.14 | 27.93 |
Protein Annotations
| Gene3D:1.20.990.10 | Gene3D:2.40.30.10 | Gene3D:3.40.50.360 | Gene3D:3.40.50.80 | MapMan:50.1.6 | EntrezGene:828554 |
| UniProt:A0A178UWR2 | ProteinID:AEE84919.1 | ProteinID:AEE84920.1 | ArrayExpress:AT4G24520 | EnsemblPlantsGene:AT4G24520 | RefSeq:AT4G24520 |
| TAIR:AT4G24520 | RefSeq:AT4G24520-TAIR-G | EnsemblPlants:AT4G24520.1 | TAIR:AT4G24520.1 | Symbol:ATR1 | EMBL:AY054688 |
| Unigene:At.144 | EMBL:BT008426 | ProteinID:CAA23011.1 | ProteinID:CAB79362.1 | InterPro:FAD-binding_1 | InterPro:Fd_Rdtase_FAD-bd |
| InterPro:Flavdoxin-like | InterPro:Flavodoxin/NO_synth | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | InterPro:Flavoprotein-like_sf | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003958 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0006979 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009698 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 |
| GO:GO:0010181 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0019748 | GO:GO:0050660 |
| GO:GO:0050661 | GO:GO:0055114 | InterPro:IPR008254 | InterPro:IPR017927 | InterPro:IPR023173 | InterPro:IPR029039 |
| HAMAP:MF_03212 | InterPro:NADPH_Cyt_P450_Rdtase_alpha | RefSeq:NP_001190823.1 | RefSeq:NP_194183.1 | ProteinID:OAO98446.1 | InterPro:OxRdtase_FAD/NAD-bd |
| InterPro:P450R | PFAM:PF00175 | PFAM:PF00258 | PFAM:PF00667 | PIRSF:PIRSF000208 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00369 | PRINTS:PR00371 | PFscan:PS50902 |
| PFscan:PS51384 | PANTHER:PTHR19384 | PANTHER:PTHR19384:SF85 | UniProt:Q9SB48 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52218 |
| SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix | UniParc:UPI00000A72AC | EMBL:X66016 | SEG:seg |
Description
ATR1NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR2]
Coordinates
chr4:-:12662776..12667262
Molecular Weight (calculated)
76769.9 Da
IEP (calculated)
4.894
GRAVY (calculated)
-0.317
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSALYASDL FKQLKSIMGT DSLSDDVVLV IATTSLALVA GFVVLLWKKT TADRSGELKP LMIPKSLMAK DEDDDLDLGS GKTRVSIFFG TQTGTAEGFA
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.