Factsheet for VIT_18s0001g07630.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62244	Soybean	endoplasmic reticulum	79.51	79.16
KRH52957	Soybean	endoplasmic reticulum	79.22	78.87
Solyc04g076380.2.1	Tomato	plastid	78.63	78.86
KRH16854	Soybean	endoplasmic reticulum	78.92	78.81
PGSC0003DMT400024163	Potato	endoplasmic reticulum	78.34	78.57
KRH72466	Soybean	cytosol, peroxisome, plastid	68.02	75.36
CDY11017	Canola	endoplasmic reticulum, plastid, vacuole	74.13	73.38
CDX92639	Canola	vacuole	73.69	72.95
CDY34288	Canola	endoplasmic reticulum	73.4	72.66
Bra019223.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	70.78	72.47
CDY03447	Canola	endoplasmic reticulum	73.11	72.37
Bra013811.1-P	Field mustard	endoplasmic reticulum	72.97	72.23
AT4G24520.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	72.24	71.82
Bra013810.1-P	Field mustard	endoplasmic reticulum	71.66	71.04
CDY34287	Canola	cytosol, endoplasmic reticulum, peroxisome	71.37	70.75
CDY70343	Canola	cytosol, endoplasmic reticulum, peroxisome	59.88	69.48
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	70.49	68.79
VIT_19s0014g03120.t01	Wine grape	cytosol	5.52	27.34
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	23.69	25.79

Protein Annotations

Gene3D:1.20.990.10	EntrezGene:100256291	wikigene:100256291	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80
MapMan:50.1.6	ProteinID:CBI19275	ProteinID:CBI19275.3	UniProt:E0CRX1	InterPro:FAD-binding_1	EMBL:FN595227
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0004743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789
GO:GO:0005829	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009698
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0010181	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016491	GO:GO:0016740	GO:GO:0019748	GO:GO:0030955
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173
InterPro:IPR029039	EntrezGene:LOC100256291	wikigene:LOC100256291	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd
InterPro:P450R	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208	PRINTS:PR00369
PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF85	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	TIGR:TC60353	TMHMM:TMhelix	UniParc:UPI0001BE1631
ArrayExpress:VIT_18s0001g07630	EnsemblPlantsGene:VIT_18s0001g07630	EnsemblPlants:VIT_18s0001g07630.t01	RefSeq:XP_002265859	RefSeq:XP_002265859.2	SEG:seg

Description

NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:E0CRX1]

Coordinates

chr18:-:5872915..5891182

Molecular Weight (calculated)

76305.6 Da

IEP (calculated)

4.897

GRAVY (calculated)

-0.182

Length

688 amino acids

Sequence
(BLAST)

001: MSSESNLINT VEAFLGVSLG SESAVVILTT TVAVILGLLI FVWRISSDRG RDVKPLVVPK AVAIPAEEDE AEAAVGKTKV TVFFGTQTGT AEGFAKALAE
101: EIKARYDKAT IKVVDLDDYA VDDDQYEEKL KKEALAFFML ATYGDGEPTD NAARFYKWFT EGKEREAWLQ QLTYGVFGLG NRQYEHFNKI AKVVDELLSE
201: QGAKRLVPAG LGDDDQCIED DFAAWRELLW PELDLLLRDE DDISAVSTPY TAVIPEYRVV IHDPIVTSCE DKFLNMANGN ASFDIHHPCR VNVAVQRELH
301: TLESDRSCIH LEFDTSGTGI TYETGDHVGV YAENCDETVE EAGRLLGQPL DLLFSIHTDK DDGTSLGSSL PPTFPGPCTI RTALACYADL LNSPRKAALS
401: ALAAHAIEPG EAERLKFLAS PQGKDEYSQW VVGSQRSLLE VMAEFPSAKP PLGVFFAAIA PRLQPRYYSI SSSPRYASHR VHVTCALVYG PSPTGRIHKG
501: VCSTWMKNAV SLEKSHNSSW APIFIRPSNF KLPVDPLTPI IMVGPGTGLA PFRGFLQERL ALKEDGVQLG PALLFFGCRN RRMDFIYEDE LNNFVEQGIL
601: SELILAFSRE GPQKEYVQHK MMDRASYIWN IISQGGYLYV CGDAKGMAKD VHRTLHTIVQ EQENVESSKA EAIVKKLHTE GRYLRDVW

Best Arabidopsis Sequence Match ( AT4G24520.1 )
(BLAST)

001: MTSALYASDL FKQLKSIMGT DSLSDDVVLV IATTSLALVA GFVVLLWKKT TADRSGELKP LMIPKSLMAK DEDDDLDLGS GKTRVSIFFG TQTGTAEGFA
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW

Arabidopsis Description

ATR1NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR2]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.