Factsheet for VIT_11s0052g00880.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02867	Soybean	endoplasmic reticulum	80.85	80.62
KRH19026	Soybean	mitochondrion	80.85	80.62
GSMUA_AchrUn_...	Banana	plastid	78.01	78.24
GSMUA_Achr1P23470_001	Banana	cytosol, peroxisome, plastid	76.6	77.14
GSMUA_Achr2P04920_001	Banana	endoplasmic reticulum	75.89	77.09
Bra010296.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	76.88	76.66
Solyc07g019460.2.1	Tomato	cytosol	77.73	76.64
CDY28169	Canola	plastid	75.6	76.58
GSMUA_Achr11P...	Banana	endoplasmic reticulum	75.32	76.51
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	76.45	76.13
PGSC0003DMT400035801	Potato	plastid	77.16	76.08
Bra011174.1-P	Field mustard	cytosol, plastid	72.34	75.89
GSMUA_Achr7P05040_001	Banana	cytosol, endoplasmic reticulum, plastid	75.89	75.89
CDX68634	Canola	plastid	76.31	75.56
CDY51656	Canola	plastid	75.6	75.5
CDY03543	Canola	plastid	75.74	75.21
Bra024095.1-P	Field mustard	endoplasmic reticulum, plastid	71.21	75.15
CDY14183	Canola	cytosol, peroxisome, plastid	74.18	75.14
Zm00001d051072_P001	Maize	plastid	21.56	74.15
Os08t0243500-01	Rice	cytosol	68.37	74.04
Zm00001d021385_P002	Maize	endoplasmic reticulum, peroxisome, plastid	74.18	73.77
EER99347	Sorghum	endoplasmic reticulum, peroxisome, plastid	73.48	73.37
TraesCS5D01G370100.1	Wheat	peroxisome	72.91	73.12
EES11568	Sorghum	plastid	71.63	72.77
Zm00001d026483_P001	Maize	plasma membrane	71.63	72.77
EES13592	Sorghum	cytosol, peroxisome, plastid	72.62	72.52
Zm00001d002024_P002	Maize	endoplasmic reticulum, peroxisome, plastid	72.2	72.4
TraesCS2B01G534200.1	Wheat	endoplasmic reticulum	71.06	72.4
Os04t0653400-01	Rice	plasma membrane	71.35	72.37
TraesCS5A01G361100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	72.06	72.26
TraesCS2D01G506600.1	Wheat	endoplasmic reticulum	70.92	72.25
TraesCS5B01G363800.1	Wheat	peroxisome	71.91	72.22
Os09t0558900-01	Rice	golgi, peroxisome, plastid	73.05	72.13
TraesCS2A01G505800.2	Wheat	endoplasmic reticulum	70.92	71.43
Zm00001d050218_P001	Maize	plasma membrane	70.35	70.66
VIT_18s0001g07630.t01	Wine grape	endoplasmic reticulum	68.79	70.49
Zm00001d024412_P002	Maize	plastid	69.79	70.39
AT4G30210.3	Thale cress	plastid	76.45	69.64
Zm00001d043355_P001	Maize	cytosol	16.03	66.08
Zm00001d028379_P001	Maize	endoplasmic reticulum	16.45	63.04
HORVU6Hr1G074580.1	Barley	cytosol	2.84	54.05
Zm00001d032090_P001	Maize	plastid	15.46	34.17
CDY34997	Canola	mitochondrion	9.22	29.95
Bra021223.1-P	Field mustard	mitochondrion	8.94	29.58
VIT_19s0014g03120.t01	Wine grape	cytosol	5.53	28.06
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	23.83	26.58

Protein Annotations

Gene3D:1.20.990.10	EntrezGene:100240979	wikigene:100240979	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80
MapMan:50.1.6	ProteinID:CCB44656	ProteinID:CCB44656.1	UniProt:F6GXH0	InterPro:FAD-binding_1	EMBL:FN594964
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039	EntrezGene:LOC100240979
wikigene:LOC100240979	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175
PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902
PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF85	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343
SUPFAM:SSF63380	TIGR:TC62227	TIGR:TC63283	TIGR:TC69580	TMHMM:TMhelix	UniParc:UPI0002108C4E
ArrayExpress:VIT_11s0052g00880	EnsemblPlantsGene:VIT_11s0052g00880	EnsemblPlants:VIT_11s0052g00880.t01	unigene:Vvi.6947	RefSeq:XP_002270732	RefSeq:XP_002270732.2
SEG:seg	:	:	:	:	:

Description

NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:F6GXH0]

Coordinates

chr11:-:18463160..18469680

Molecular Weight (calculated)

78129.6 Da

IEP (calculated)

4.953

GRAVY (calculated)

-0.283

Length

705 amino acids

Sequence
(BLAST)

001: MQSSSVKVSP FDLMSAIIKG SMDQSNVSSE SGGAAAMVLE NREFIMILTT SIAVLIGCVV VLIWRRSGQK QSKTPEPPKP LIVKDLEVEV DDGKQKVTIF
101: FGTQTGTAEG FAKALAEEAK ARYEKAIFKV VDLDDYAGDD DEYEEKLKKE TLAFFFLATY GDGEPTDNAA RFYKWFAEGK ERGEWLQNLK YGVFGLGNRQ
201: YEHFNKVAKV VDDIITEQGG KRIVPVGLGD DDQCIEDDFA AWRELLWPEL DQLLRDEDDA TTVSTPYTAA VLEYRVVFHD PEGASLQDKS WGSANGHTVH
301: DAQHPCRANV AVRKELHTPA SDRSCTHLEF DISGTGLTYE TGDHVGVYCE NLPETVEEAE RLLGFSPDVY FSIHTEREDG TPLSGSSLSP PFPPCTLRTA
401: LTRYADVLSS PKKSALVALA AHASDPSEAD RLKYLASPSG KDEYAQWVVA SQRSLLEIMA EFPSAKPPLG VFFAAVAPRL QPRYYSISSS PKMVPSRIHV
501: TCALVCDKMP TGRIHKGICS TWMKYAVPLE ESQDCSWAPI FVRQSNFKLP ADTSVPIIMI GPGTGLAPFR GFLQERFALK EAGAELGSSI LFFGCRNRKM
601: DYIYEDELNG FVESGALSEL IVAFSREGPT KEYVQHKMME KASDIWNVIS QGGYIYVCGD AKGMARDVHR TLHTILQEQG SLDSSKAESM VKNLQMTGRY
701: LRDVW

Best Arabidopsis Sequence Match ( AT4G30210.3 )
(BLAST)

001: MKNMMNYKLK LCSVSKNSKG VSLSPTPHLT KPPTIHTERD LLLPSSSFFF LLLSSSSYNI YNAMSSSSSS STSMIDLMAA IIKGEPVIVS DPANASAYES
101: VAAELSSMLI ENRQFAMIVT TSIAVLIGCI VMLVWRRSGS GNSKRVEPLK PLVIKPREEE IDDGRKKVTI FFGTQTGTAE GFAKALGEEA KARYEKTRFK
201: IVDLDDYAAD DDEYEEKLKK EDVAFFFLAT YGDGEPTDNA ARFYKWFTEG NDRGEWLKNL KYGVFGLGNR QYEHFNKVAK VVDDILVEQG AQRLVQVGLG
301: DDDQCIEDDF TAWREALWPE LDTILREEGD TAVATPYTAA VLEYRVSIHD SEDAKFNDIN MANGNGYTVF DAQHPYKANV AVKRELHTPE SDRSCIHLEF
401: DIAGSGLTYE TGDHVGVLCD NLSETVDEAL RLLDMSPDTY FSLHAEKEDG TPISSSLPPP FPPCNLRTAL TRYACLLSSP KKSALVALAA HASDPTEAER
501: LKHLASPAGK DEYSKWVVES QRSLLEVMAE FPSAKPPLGV FFAGVAPRLQ PRFYSISSSP KIAETRIHVT CALVYEKMPT GRIHKGVCST WMKNAVPYEK
601: SENCSSAPIF VRQSNFKLPS DSKVPIIMIG PGTGLAPFRG FLQERLALVE SGVELGPSVL FFGCRNRRMD FIYEEELQRF VESGALAELS VAFSREGPTK
701: EYVQHKMMDK ASDIWNMISQ GAYLYVCGDA KGMARDVHRS LHTIAQEQGS MDSTKAEGFV KNLQTSGRYL RDVW

Arabidopsis Description

ATR2P450 reductase 2 [Source:TAIR;Acc:AT4G30210]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.