Factsheet for TraesCS2B01G534200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G040900.1	Barley	cytosol	9.1	98.44
TraesCS2D01G506600.1	Wheat	endoplasmic reticulum	98.12	98.12
TraesCS2A01G505800.2	Wheat	endoplasmic reticulum	97.98	96.86
HORVU2Hr1G074570.1	Barley	cytosol	6.36	91.67
HORVU2Hr1G074590.1	Barley	cytosol	5.92	91.11
Os04t0653400-01	Rice	plasma membrane	88.01	87.63
EES11568	Sorghum	plastid	86.99	86.74
Zm00001d002024_P002	Maize	endoplasmic reticulum, peroxisome, plastid	87.72	86.34
Zm00001d026483_P001	Maize	plasma membrane	86.56	86.31
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	72.4	71.06
TraesCS5B01G363800.1	Wheat	peroxisome	71.97	70.94
KRH02867	Soybean	endoplasmic reticulum	70.95	69.45
KRH19026	Soybean	mitochondrion	70.81	69.31
CDY14183	Canola	cytosol, peroxisome, plastid	68.79	68.39
CDY28169	Canola	plastid	68.5	68.1
CDY51656	Canola	plastid	68.93	67.56
Bra010296.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	68.93	67.47
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	68.93	67.37
PGSC0003DMT400035801	Potato	plastid	69.36	67.13
Bra011174.1-P	Field mustard	cytosol, plastid	65.17	67.11
Bra024095.1-P	Field mustard	endoplasmic reticulum, plastid	64.74	67.07
CDX68634	Canola	plastid	68.93	66.99
CDY03543	Canola	plastid	68.64	66.9
Solyc07g019460.2.1	Tomato	cytosol	69.08	66.85
AT4G30210.3	Thale cress	plastid	68.79	61.5
CDY34997	Canola	mitochondrion	8.67	27.65
Bra021223.1-P	Field mustard	mitochondrion	8.24	26.76
TraesCS3B01G314200.1	Wheat	cytosol	24.28	26.62
TraesCS3B01G100500.1	Wheat	plastid	24.13	26.18
TraesCS6B01G187700.4	Wheat	cytosol	9.97	25.37

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173
InterPro:IPR029039	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175
PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902
PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF107	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G534200	EnsemblPlants:TraesCS2B01G534200.1	TIGR:cd06204	SEG:seg

Description

No Description!

Coordinates

chr2B:-:730562550..730569793

Molecular Weight (calculated)

76310.2 Da

IEP (calculated)

4.710

GRAVY (calculated)

-0.262

Length

692 amino acids

Sequence
(BLAST)

001: MALEAAREWA ASVLPPELAA AAGGDPLAAL AATAAALLAG LLVLAFWLRS GGSAPPKPPP ASFRPPPVKV DADDADDGRK RVTIFFGTQT GTAEGFAKAM
101: AEEAKARYEK VVFKVVDLDD YAAEDDEYEE KLKKETFALF FLATYGDGEP TDNAARFYKW FTEGKEKEVW LKDFNYAVFG LGNRQYEHFN KVAKEVDELL
201: LEQGGKRLVP CGLGDDDQCI EDDFTAWKEL VWPELDQLLR DEDDTTGATT PYTAAIPEYR IVFIDKSDLE FEDKSWTLAN GNGVIDAQHP CRANVAVRKE
301: LHKPASDRSC IHLEFDISGT GLVYETGDHV GVYSENSIET VEQAETLLGL SPDTLFSIHA DAEDGSPRKG GGSLAPPFPS PCTLRTALLR YADLLNAPKK
401: AALTALAAHA SDPTEAERLR FLASPAGKDE YAQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR FYSISSSPKL APSRIHVTCA LVYGPTPTER
501: IHQGVCSTWM KNTLPLEYSE ECSWAPVFVR QSNFRLPADP STPIIMIGPG TGLAPFRGFL QERLALKESG VELGSSVLFF GCRNREMDYI YEEELQNFLQ
601: EGALSELIVA YSREGPTKEY VQHKMVDKAT EIWNVISQGG YIYVCGDAKG MAKDVHRVLH TIVQKQGSLD NSKTELYVKN LQMEGRYLRD VW

Best Arabidopsis Sequence Match ( AT4G24520.1 )
(BLAST)

001: MTSALYASDL FKQLKSIMGT DSLSDDVVLV IATTSLALVA GFVVLLWKKT TADRSGELKP LMIPKSLMAK DEDDDLDLGS GKTRVSIFFG TQTGTAEGFA
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW

Arabidopsis Description

ATR1NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR2]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.