Factsheet for TraesCS2A01G505800.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G506600.1	Wheat	endoplasmic reticulum	97.86	98.99
TraesCS2B01G534200.1	Wheat	endoplasmic reticulum	96.86	97.98
HORVU2Hr1G040900.1	Barley	cytosol	8.86	96.88
HORVU2Hr1G074570.1	Barley	cytosol	6.14	89.58
HORVU2Hr1G074590.1	Barley	cytosol	5.71	88.89
EES11568	Sorghum	plastid	87.14	87.9
Zm00001d026483_P001	Maize	plasma membrane	87.0	87.75
Os04t0653400-01	Rice	plasma membrane	85.71	86.33
Zm00001d002024_P002	Maize	endoplasmic reticulum, peroxisome, plastid	86.0	85.63
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	71.43	70.92
TraesCS5A01G361100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	70.71	70.41
KRH02867	Soybean	endoplasmic reticulum	69.86	69.17
KRH19026	Soybean	mitochondrion	69.71	69.02
CDY14183	Canola	cytosol, peroxisome, plastid	68.14	68.53
CDY28169	Canola	plastid	67.86	68.25
CDY51656	Canola	plastid	68.29	67.71
Bra010296.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	68.29	67.61
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	68.29	67.51
PGSC0003DMT400035801	Potato	plastid	68.86	67.41
Solyc07g019460.2.1	Tomato	cytosol	68.71	67.27
Bra011174.1-P	Field mustard	cytosol, plastid	64.57	67.26
Bra024095.1-P	Field mustard	endoplasmic reticulum, plastid	64.14	67.22
CDX68634	Canola	plastid	68.29	67.13
CDY03543	Canola	plastid	68.0	67.04
AT4G30210.3	Thale cress	plastid	68.14	61.63
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	23.29	28.7
CDY34997	Canola	mitochondrion	8.43	27.19
TraesCS3A01G280500.2	Wheat	plastid	24.71	26.99
Bra021223.1-P	Field mustard	mitochondrion	8.0	26.29
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	23.14	25.76
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	22.86	24.54

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173
InterPro:IPR029039	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175
PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902
PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF107	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G505800	EnsemblPlants:TraesCS2A01G505800.2	TIGR:cd06204	SEG:seg

Description

No Description!

Coordinates

chr2A:-:733922292..733929107

Molecular Weight (calculated)

77382.3 Da

IEP (calculated)

4.640

GRAVY (calculated)

-0.292

Length

700 amino acids

Sequence
(BLAST)

001: MALEAAREWA ASVLPPELAA AAGGDPLAAL AATAAALLAG LLVLAFWLRS GGSAPPKPPP ASFRPPPVKV DADDADDGRK RVTIFFGTQT GTAEGFAKAM
101: AEEAKARYEK VLFKVVDLDD YAAEDDEYEE KLKKETFALF FLATYGDGEP TDNAARFYKW FTEGKEKEVW LKDFNYAVFG LGNRQYEHFN KVAKEVDELL
201: LEQGGNRLVP CGLGDDDQCI EDDFTAWYEN DGWYKKELVW PELDQLLRDE DDTTGATTPY TAAIPEYRVV FIDKSDLEFE DKSWTLANGN GVIDAQHPCR
301: ANVAVRKELH KPASDRSCIH LEFDISGTGL VYETGDHVGV YSENSIETVE QAETLLDLSP DTVFSIHADA EDGSPRKGGG SLAPPFPSPC TLRTALLRYA
401: DLLNAPKKAA LTALAAHASD PTEAERLRFL ASPAGKDEYA QWIVASQRSL LEVMAAFPSA KPPLGVFFAA IAPRLQPRFY SISSSPKLAP SRIHVTCALV
501: YGPTPTERIH QGVCSTWMKN TLPLEYSEEC SWAPIFVRQS NFRLPADPST PIIMIGPGTG LAPFRGFLQE RLALKESGAE LGSSVLFFGC RNREMDYIYE
601: EELQNFLQEG ALSELIVAYS REGPTKEYVQ HKMVDKATEI WNVISQGGYI YVCGDAKGMA KDVHRVLHTI VQKQGSLDNS KTELYVKNLQ MEGRYLRDVW

Best Arabidopsis Sequence Match ( AT4G24520.1 )
(BLAST)

001: MTSALYASDL FKQLKSIMGT DSLSDDVVLV IATTSLALVA GFVVLLWKKT TADRSGELKP LMIPKSLMAK DEDDDLDLGS GKTRVSIFFG TQTGTAEGFA
101: KALSEEIKAR YEKAAVKVID LDDYAADDDQ YEEKLKKETL AFFCVATYGD GEPTDNAARF YKWFTEENER DIKLQQLAYG VFALGNRQYE HFNKIGIVLD
201: EELCKKGAKR LIEVGLGDDD QSIEDDFNAW KESLWSELDK LLKDEDDKSV ATPYTAVIPE YRVVTHDPRF TTQKSMESNV ANGNTTIDIH HPCRVDVAVQ
301: KELHTHESDR SCIHLEFDIS RTGITYETGD HVGVYAENHV EIVEEAGKLL GHSLDLVFSI HADKEDGSPL ESAVPPPFPG PCTLGTGLAR YADLLNPPRK
401: SALVALAAYA TEPSEAEKLK HLTSPDGKDE YSQWIVASQR SLLEVMAAFP SAKPPLGVFF AAIAPRLQPR YYSISSSPRL APSRVHVTSA LVYGPTPTGR
501: IHKGVCSTWM KNAVPAEKSH ECSGAPIFIR ASNFKLPSNP STPIVMVGPG TGLAPFRGFL QERMALKEDG EELGSSLLFF GCRNRQMDFI YEDELNNFVD
601: QGVISELIMA FSREGAQKEY VQHKMMEKAA QVWDLIKEEG YLYVCGDAKG MARDVHRTLH TIVQEQEGVS SSEAEAIVKK LQTEGRYLRD VW

Arabidopsis Description

ATR1NADPH--cytochrome P450 reductase [Source:UniProtKB/TrEMBL;Acc:A0A178UWR2]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.