CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome

Predictor Summary:

nucleus 1
peroxisome 1
plastid 2
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51656	Canola	plastid	96.19	96.46
CDY28169	Canola	plastid	92.66	94.25
CDX68634	Canola	plastid	94.35	93.82
CDY03543	Canola	plastid	93.08	92.82
CDY14183	Canola	cytosol, peroxisome, plastid	88.7	90.23
AT4G30210.3	Thale cress	plastid	92.8	84.88
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	76.13	76.45
KRH02867	Soybean	endoplasmic reticulum	75.28	75.39
KRH19026	Soybean	mitochondrion	74.72	74.82
GSMUA_AchrUn_...	Banana	plastid	71.75	72.26
GSMUA_Achr2P04920_001	Banana	endoplasmic reticulum	70.76	72.19
PGSC0003DMT400035801	Potato	plastid	72.46	71.75
Zm00001d051072_P001	Maize	plastid	20.62	71.22
Solyc07g019460.2.1	Tomato	cytosol	71.89	71.19
GSMUA_Achr11P...	Banana	endoplasmic reticulum	69.35	70.75
GSMUA_Achr1P23470_001	Banana	cytosol, peroxisome, plastid	69.35	70.14
Os08t0243500-01	Rice	cytosol	64.41	70.05
Zm00001d021385_P002	Maize	endoplasmic reticulum, peroxisome, plastid	69.77	69.68
GSMUA_Achr7P05040_001	Banana	cytosol, endoplasmic reticulum, plastid	69.35	69.65
EES13592	Sorghum	cytosol, peroxisome, plastid	68.79	68.98
TraesCS2D01G506600.1	Wheat	endoplasmic reticulum	67.37	68.93
TraesCS2B01G534200.1	Wheat	endoplasmic reticulum	67.37	68.93
TraesCS5D01G370100.1	Wheat	peroxisome	68.36	68.85
TraesCS5A01G361100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	68.36	68.85
EER99347	Sorghum	endoplasmic reticulum, peroxisome, plastid	68.64	68.84
TraesCS5B01G363800.1	Wheat	peroxisome	68.08	68.66
Zm00001d026483_P001	Maize	plasma membrane	67.23	68.59
EES11568	Sorghum	plastid	66.95	68.3
TraesCS2A01G505800.2	Wheat	endoplasmic reticulum	67.51	68.29
Os04t0653400-01	Rice	plasma membrane	66.95	68.2
Zm00001d024412_P002	Maize	plastid	67.09	67.95
Zm00001d050218_P001	Maize	plasma membrane	66.95	67.52
Zm00001d002024_P002	Maize	endoplasmic reticulum, peroxisome, plastid	66.95	67.43
Os09t0558900-01	Rice	golgi, peroxisome, plastid	67.8	67.23
Zm00001d043355_P001	Maize	cytosol	15.54	64.33
CDY11017	Canola	endoplasmic reticulum, plastid, vacuole	62.85	64.03
CDX92639	Canola	vacuole	62.71	63.88
CDY03447	Canola	endoplasmic reticulum	62.15	63.31
CDY34288	Canola	endoplasmic reticulum	62.15	63.31
CDY34287	Canola	cytosol, endoplasmic reticulum, peroxisome	61.44	62.68
CDY70343	Canola	cytosol, endoplasmic reticulum, peroxisome	51.98	62.06
Zm00001d028379_P001	Maize	endoplasmic reticulum	15.96	61.41
HORVU6Hr1G074580.1	Barley	cytosol	2.82	54.05
Zm00001d032090_P001	Maize	plastid	14.97	33.23
CDY34997	Canola	mitochondrion	9.18	29.95
CDX91986	Canola	mitochondrion	23.59	26.72
CDX74264	Canola	mitochondrion	23.31	26.57
CDY12377	Canola	plastid	7.34	18.57
CDY06413	Canola	mitochondrion, nucleus	24.01	17.15

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	GO:A0A078C5P0
EnsemblPlants:CDX72222	ProteinID:CDX72222	ProteinID:CDX72222.1	InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like
InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003958	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00099679001	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039
HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175	PFAM:PF00258
PFAM:PF00667	PIRSF:PIRSF000208	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384
PANTHER:PTHR19384	PANTHER:PTHR19384:SF85	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0004EDDA8A	SEG:seg	:	:	:

Description

BnaC07g42440D

Coordinates

chrLK031796:+:55786..59500

Molecular Weight (calculated)

78645.0 Da

IEP (calculated)

5.066

GRAVY (calculated)

-0.311

Length

708 amino acids

Sequence
(BLAST)

001: MSSSSSSPFD LMSAIIKGEP VVVSDPANAS AYESVAAELS SMLIENRQFA MIISTSIAVL IGCIVMLLWR RSGGSGSSKR VETLKPLVIK PPREDEVDDG
101: RKKVTIFFGT QTGTAEGFAK ALGEEARARY EKTRFKIVDL DDYAADDDEY EEKLKKEDVA FFFLATYGDG EPTDNAARFY KWFTEGDDRG EWLKNLKYGV
201: FGLGNRQYEH FNKVAKVVDD ILVEQGAQRL VHVGLGDDDQ CIEDDFTAWR EALWPELDTI LREEGDTAVT PYTAAVLEYR VSIHNSADAL NEKNLANGNG
301: HAVFDAQHPY RANVAVRREL HTPESDRSCT HLEFDIAGSG LTYETGDHVG VLSDNLNETV EEALRLLDMS PDTYFSLHSD KEDGTPISSS LPPTFPPCNL
401: RTALTRYACL LSSPKKSALL ALAAHASDPT EAERLKHLAS PAGKDEYSKW VVESQRSLLE VMAEFPSAKP PLGVFFAAVA PRLQPRFYSI SSSPKIAETR
501: IHVTCALVYE KMPTGRIHKG VCSTWMKSAV PYEKSENCCS APIFVRQSNF KLPSDSKVPI IMIGPGTGLA PFRGFLQERL ALVESGVELG PSVLFFGCRN
601: RRMDFIYEEE LQRFLESGAL SELSVAFSRE GPTKEYVQHK MMDKASDIWN MISEGAYVYV CGDAKGMARD VHRSLHTIAQ EQGSMDSTKA ESFVKNLQMS
701: GRYLRDVW

Best Arabidopsis Sequence Match ( AT4G30210.3 )
(BLAST)

001: MKNMMNYKLK LCSVSKNSKG VSLSPTPHLT KPPTIHTERD LLLPSSSFFF LLLSSSSYNI YNAMSSSSSS STSMIDLMAA IIKGEPVIVS DPANASAYES
101: VAAELSSMLI ENRQFAMIVT TSIAVLIGCI VMLVWRRSGS GNSKRVEPLK PLVIKPREEE IDDGRKKVTI FFGTQTGTAE GFAKALGEEA KARYEKTRFK
201: IVDLDDYAAD DDEYEEKLKK EDVAFFFLAT YGDGEPTDNA ARFYKWFTEG NDRGEWLKNL KYGVFGLGNR QYEHFNKVAK VVDDILVEQG AQRLVQVGLG
301: DDDQCIEDDF TAWREALWPE LDTILREEGD TAVATPYTAA VLEYRVSIHD SEDAKFNDIN MANGNGYTVF DAQHPYKANV AVKRELHTPE SDRSCIHLEF
401: DIAGSGLTYE TGDHVGVLCD NLSETVDEAL RLLDMSPDTY FSLHAEKEDG TPISSSLPPP FPPCNLRTAL TRYACLLSSP KKSALVALAA HASDPTEAER
501: LKHLASPAGK DEYSKWVVES QRSLLEVMAE FPSAKPPLGV FFAGVAPRLQ PRFYSISSSP KIAETRIHVT CALVYEKMPT GRIHKGVCST WMKNAVPYEK
601: SENCSSAPIF VRQSNFKLPS DSKVPIIMIG PGTGLAPFRG FLQERLALVE SGVELGPSVL FFGCRNRRMD FIYEEELQRF VESGALAELS VAFSREGPTK
701: EYVQHKMMDK ASDIWNMISQ GAYLYVCGDA KGMARDVHRS LHTIAQEQGS MDSTKAEGFV KNLQTSGRYL RDVW

Arabidopsis Description

ATR2P450 reductase 2 [Source:TAIR;Acc:AT4G30210]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.