CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74264	Canola	mitochondrion	91.52	92.11
AT3G02280.2	Thale cress	mitochondrion	83.52	83.79
KRH01775	Soybean	cytosol, mitochondrion	64.96	65.17
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	65.6	64.87
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	64.8	64.29
Solyc02g085820.2.1	Tomato	cytosol	64.64	64.13
GSMUA_Achr1P11640_001	Banana	cytosol	57.6	60.5
TraesCS3D01G280300.1	Wheat	plastid	60.32	59.46
HORVU3Hr1G069620.2	Barley	plasma membrane	59.36	58.98
Os01t0733600-01	Rice	cytosol	58.72	58.63
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	59.36	58.43
TraesCS3A01G280500.2	Wheat	plastid	59.52	58.03
TraesCS3B01G314200.1	Wheat	cytosol	58.24	57.69
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	51.2	56.34
TraesCS3B01G100500.1	Wheat	plastid	56.32	55.17
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	55.52	53.22
TraesCS1D01G227800.1	Wheat	cytosol, peroxisome, plastid	52.0	53.1
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	44.32	52.96
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	52.8	52.46
KRH46914	Soybean	cytosol, nucleus, peroxisome	27.68	49.29
CDY06413	Canola	mitochondrion, nucleus	75.68	47.73
CDY12377	Canola	plastid	16.16	36.07
CDY11017	Canola	endoplasmic reticulum, plastid, vacuole	27.36	24.6
CDY34288	Canola	endoplasmic reticulum	27.2	24.46
CDX92639	Canola	vacuole	27.04	24.32
CDY03447	Canola	endoplasmic reticulum	27.04	24.32
CDY51656	Canola	plastid	27.04	23.94
CDY14183	Canola	cytosol, peroxisome, plastid	26.4	23.71
CDY28169	Canola	plastid	26.4	23.71
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	26.72	23.59
CDY34287	Canola	cytosol, endoplasmic reticulum, peroxisome	26.08	23.49
CDY03543	Canola	plastid	26.4	23.24
CDX68634	Canola	plastid	26.4	23.17
CDY70343	Canola	cytosol, endoplasmic reticulum, peroxisome	20.96	22.09
CDY34997	Canola	mitochondrion	5.44	15.67

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:7.11.3.1.1.2	GO:A0A078DRS5
EnsemblPlants:CDX91986	ProteinID:CDX91986	ProteinID:CDX91986.1	InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like
InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003958	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00153638001	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039
HAMAP:MF_03178	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:NDOR1	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00258
PFAM:PF00667	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384
PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0004EDBF29
SEG:seg	:	:	:	:	:

Description

BnaC03g32880D

Coordinates

chrLK031870:+:1142723..1146482

Molecular Weight (calculated)

70559.3 Da

IEP (calculated)

6.651

GRAVY (calculated)

-0.334

Length

625 amino acids

Sequence
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGCPASIV STDEFDPSSL PHEESVVFVV STTGQGDSPD SFKEFWRFLL QRNLGNSWLQ RVRFAVFGLG
101: DSGYQKYNFV AKKLDKRLLD LGATTIVEKG LGDDQHPSGY EATLDPWMLS LWSTLYQINP KYFPKGPDVM IPQDELTDQP KYRILYHKQE TLEPELMAES
201: DIIERARGMS PGKLSKDKTK PDCFLKMIKN EVLTKAGSTK DVRHFEFQFV SSSIKYEVGD VVELLPSQDS SAIDAFIKRC HLDPESFITV CPRETVNNGS
301: CGEVITHHVP IKLKTFVELT MDVTSASPRR YFFEVMSFYA TAELEKERLQ YFASAEGRDD LYNYNQKERK SVLEVLEDFS SVQMPFEWLV QLVPSLKPRA
401: FSISSSPLAH PGQVHLTVSV VSWITPSYPY KRTRKGLCSS WLASLTPEQE INIPIWFHKG SLPAPPQSLP LILVGPGTGC APFRGFIAER AVQAQTSPIA
501: PVMFFFGCRN KDTDFLYKDF WESHAREGGM LSEVKGGGFY TAFSRDQPKK VYVQHRILEM RKKVWDLLCD GAAVYVAGSS TKMPCDVMSA LEEIVMEETG
601: GSKEMASRWL KALEKAGRYN VEAWS

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.