Factsheet for GSMUA_Achr1P11640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0733600-01	Rice	cytosol	65.04	61.82
TraesCS3D01G280300.1	Wheat	plastid	65.55	61.51
TraesCS3B01G314200.1	Wheat	cytosol	65.21	61.49
TraesCS3A01G280500.2	Wheat	plastid	66.05	61.31
HORVU3Hr1G069620.2	Barley	plasma membrane	64.54	61.05
KRH01775	Soybean	cytosol, mitochondrion	62.18	59.39
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	63.36	59.37
Solyc02g085820.2.1	Tomato	cytosol	62.86	59.37
AT3G02280.2	Thale cress	mitochondrion	62.02	59.23
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	62.52	59.05
CDX74264	Canola	mitochondrion	60.84	58.29
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	61.85	58.23
Bra001039.1-P	Field mustard	cytosol, mitochondrion	60.67	58.23
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	55.46	58.1
CDX91986	Canola	mitochondrion	60.5	57.6
TraesCS1D01G227800.1	Wheat	cytosol, peroxisome, plastid	57.65	56.05
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	60.67	55.37
TraesCS3B01G100500.1	Wheat	plastid	59.33	55.33
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	57.31	54.21
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	46.89	53.35
KRH46914	Soybean	cytosol, nucleus, peroxisome	27.06	45.87
CDY06413	Canola	mitochondrion, nucleus	56.97	34.21
GSMUA_Achr2P04920_001	Banana	endoplasmic reticulum	26.72	22.91
GSMUA_Achr11P...	Banana	endoplasmic reticulum	26.72	22.91
GSMUA_Achr7P05040_001	Banana	cytosol, endoplasmic reticulum, plastid	26.39	22.27
GSMUA_Achr1P23470_001	Banana	cytosol, peroxisome, plastid	25.21	21.43
GSMUA_AchrUn_...	Banana	plastid	25.21	21.34

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:7.11.3.1.1.2	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0010181	GO:GO:0016491	GO:GO:0016651
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G11640_001	EnsemblPlants:GSMUA_Achr1P11640_001	EnsemblPlants:GSMUA_Achr1T11640_001	InterPro:IPR008254	InterPro:IPR017927
InterPro:IPR023173	InterPro:IPR029039	UniProt:M0RZ23	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175
PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384
PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380
UniParc:UPI0002957703	SEG:seg	:	:	:	:

Description

Putative NADPH-dependent diflavin oxidoreductase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G11640_001]

Coordinates

chr1:-:8900647..8909557

Molecular Weight (calculated)

67425.7 Da

IEP (calculated)

7.266

GRAVY (calculated)

-0.304

Length

595 amino acids

Sequence
(BLAST)

001: MEEKSSHLLV LYASQTGNAM DAAERVGREA ERGGCPSVQV LPIDRLDASC LPDQEIVIFV VSTTGQGDIP DSMKVFWRFL LQRNLSNQWL EGLHYAVFGL
101: GDSGYQKYNF TAKKLDKRLS DLGAKPLIEK GLGDDQHPSG YEGALDPWLL SLWKMLNTVH PNILPRVSDI MDPSKRSLDH AKIEVIYHSS DKMQPDHLTA
201: YDLESSEVVI ESACSMSPAQ FHYHDKKPQY LLHMITNQRL TNVDHSRDVR HFEFEASSNV IDYQVGDVLE ILPSQNPAAV DAFIQRCNLD PNCYITVKAR
301: DTEKQSVYKS IKSLVRPIKL KNFVELTMDV ASASPRRYFF EVMSFYATAE YEKERLQYFA SPEGMDDLYQ YNQRERRTVV EVLEDFPSVQ MPFEWLVQLV
401: PPLKTRAFSI SSSPSVHPNQ VHLTVSIVSW TTPFKRKRHG LCSSWLAGLD PFKRRVHIPA WVTRGSLPPP PPSLPLILIG PGTGCAPFRA FVEERALQNL
501: TRSTSPILFF FGCRNQSPQK IYVQHKMKEE SKRIWSLLSS GAAIYIAGSS TKMPADVTST LEEIIAVENG MSKESAARWL RLLEKAGKFF IEAWS

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.