Factsheet for Bra001039.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74264	Canola	mitochondrion	97.1	96.94
AT3G02280.2	Thale cress	mitochondrion	84.19	83.79
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	66.13	64.87
KRH01775	Soybean	cytosol, mitochondrion	65.16	64.85
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	65.32	64.29
Solyc02g085820.2.1	Tomato	cytosol	64.84	63.81
GSMUA_Achr1P11640_001	Banana	cytosol	58.23	60.67
HORVU3Hr1G069620.2	Barley	plasma membrane	59.68	58.82
TraesCS3D01G280300.1	Wheat	plastid	60.0	58.68
TraesCS3A01G280500.2	Wheat	plastid	60.32	58.35
TraesCS3B01G314200.1	Wheat	cytosol	58.87	57.84
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	59.19	57.8
Os01t0733600-01	Rice	cytosol	58.06	57.51
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	51.29	55.99
TraesCS3B01G100500.1	Wheat	plastid	56.29	54.7
TraesCS1D01G227800.1	Wheat	cytosol, peroxisome, plastid	52.9	53.59
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	54.03	53.26
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	55.65	52.91
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	43.87	52.01
KRH46914	Soybean	cytosol, nucleus, peroxisome	28.06	49.57
Bra013811.1-P	Field mustard	endoplasmic reticulum	27.26	24.32
Bra019223.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	26.29	24.26
Bra013810.1-P	Field mustard	endoplasmic reticulum	26.61	23.78
Bra010296.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	26.77	23.48
Bra011174.1-P	Field mustard	cytosol, plastid	25.32	23.36
Bra024095.1-P	Field mustard	endoplasmic reticulum, plastid	25.16	23.35
Bra021223.1-P	Field mustard	mitochondrion	5.48	15.96
Bra036886.1-P	Field mustard	cytosol, nucleus, peroxisome	7.1	14.77

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:7.11.3.1.1.2	EnsemblPlantsGene:Bra001039
EnsemblPlants:Bra001039.1	EnsemblPlants:Bra001039.1-P	InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth
InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003958	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0010181	GO:GO:0016043	GO:GO:0016226
GO:GO:0016491	GO:GO:0016651	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR008254
InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039	UniProt:M4CA10	HAMAP:MF_03178	InterPro:NADPH_Cyt_P450_Rdtase_alpha
InterPro:NDOR1	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369
PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0002540865	SEG:seg	:

Description

AT3G02280 (E=1e-312) | flavodoxin family protein

Coordinates

chrA03:+:14491470..14494853

Molecular Weight (calculated)

70133.9 Da

IEP (calculated)

6.735

GRAVY (calculated)

-0.364

Length

620 amino acids

Sequence
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGCPASIA STDEFDPSCL PHEESVVFVV STTGQGDSPD SFKEFWRFLL QRNLGNSWLQ RLRFAVFGLG
101: DSGYQKYNFV AKKLDKRLLD LGATTIVEKG LGDDQHPSGY EATLDPWMLS LWSMLYKINP KYFPKGPDVM IPHDELTDQP KYRILYHKQE TLESELMAES
201: DMIERARGMS PGKLSKDKTK PDCFLKMTKN EVLTKAGSTK DVRHFEFQFV SSSIKYEVGD VVELLPSQDS SAIDAFIKRC HLDPESFITV CPRETENNGS
301: CGEVITHVPI KLKTFVELTM DVTSASPRRY FFEVMSFYTT DEREKERLQY FASAEGRDDL YNYNQKERKS VLEVLVDFPS VQMPFEWLVQ LVPSLKPRAF
401: SISSSPLAHP AQVHLTVSVV SWTRYKRTLK GLCSTWLASL TPEQEINIPV WFGKGSLPAP PQSLPLILVG PGTGCAPFRG FIAERAVQAE TSPIAPVMFF
501: FGCRNKDTDF LYRDFWESHA REGGMLSEVK GGGFYTAFSR DQPKKVYVQH KIREMRKKVW DLLCDGAALY VAGSSTKMPC DVMSALEEIV MEETGGSKEM
601: ASRWLKALEK AGRYNVEAWS

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.