Factsheet for TraesCS3D01G280300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G280500.2	Wheat	plastid	94.32	93.29
TraesCS3B01G314200.1	Wheat	cytosol	91.8	92.23
HORVU3Hr1G069620.2	Barley	plasma membrane	90.54	91.26
Os01t0733600-01	Rice	cytosol	75.24	76.2
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	74.76	74.65
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	55.99	67.88
TraesCS1D01G227800.1	Wheat	cytosol, peroxisome, plastid	65.14	67.48
GSMUA_Achr1P11640_001	Banana	cytosol	61.51	65.55
CDX91986	Canola	mitochondrion	59.46	60.32
Bra001039.1-P	Field mustard	cytosol, mitochondrion	58.68	60.0
AT3G02280.2	Thale cress	mitochondrion	58.83	59.87
KRH01775	Soybean	cytosol, mitochondrion	58.68	59.71
CDX74264	Canola	mitochondrion	58.2	59.42
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	58.83	59.02
Solyc02g085820.2.1	Tomato	cytosol	58.36	58.73
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	58.04	58.41
KRH46914	Soybean	cytosol, nucleus, peroxisome	27.44	49.57
CDY06413	Canola	mitochondrion, nucleus	53.63	34.31
TraesCS5D01G370100.1	Wheat	peroxisome	27.13	24.47
TraesCS2D01G506600.1	Wheat	endoplasmic reticulum	26.5	24.28

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:7.11.3.1.1.2	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173
InterPro:IPR029039	HAMAP:MF_03178	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:NDOR1	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175
PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384
PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380
EnsemblPlantsGene:TraesCS3D01G280300	EnsemblPlants:TraesCS3D01G280300.1	TIGR:cd06207	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:+:388444377..388448860

Molecular Weight (calculated)

70453.0 Da

IEP (calculated)

6.311

GRAVY (calculated)

-0.323

Length

634 amino acids

Sequence
(BLAST)

001: MGPSPSPPQP PPPLPATGRL LVLYASQTGN AMDAAERVGR EAERGGCPAV DVLSMDSFDP SCLPGERSVV FVVSTTGQGD PPDSMKGFWR YLLKKDLGAR
101: WLEGLRFAVF GLGDSGYQKY NLPAKKIDRR LLQLGAEIII EIGLGDDQHP SGYEGALDPW LLSLWESLNK ANPSLLPRIT DIINPNLNYL GDSKIEVIYY
201: SCNDAPPDSV VSDSKKLIER ARLMSPALKF HSDGEPQYML KMVTNQRLTK EDYEKDVRHF ELEDPSSAIS YQVGDALEIL PSQNPSAVNA FIERCNLDPD
301: SYITIRAKGG DEVSNGSLLN GSMGRIKLST FVALTMDVAS GSPRRYFFEI MSHFATAEHE KERLQYFASP EGRDDLYQYN QKESRTVLEV LEDFPSVHMP
401: FEWLVQLTPP LKKRAFSISS SPLVHPNQIH LTVSIVSWLT PFKRTRQGLC STWLAGLNPN EENLIPCWVH KGSLPPPKPS IPLLLIGPGT GCAPFRAFVE
501: ERAAQSARES TAPILFFFGC RNEDNDFLYK DFWLKHAQDK GVLSLKEGGG FFVAFSRDQP QKVYVQHKIK EQSARVWNML CSGAAIYVAG SSTKMPADVT
601: AALEEVVRQK GGEAASGWLR KLERAGKFNI ETWS

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.