Factsheet for VIT_14s0006g03070.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
endoplasmic reticulum 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01775	Soybean	cytosol, mitochondrion	67.56	68.54
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	68.2	68.41
Solyc02g085820.2.1	Tomato	cytosol	68.04	68.25
AT3G02280.2	Thale cress	mitochondrion	65.82	66.77
CDX74264	Canola	mitochondrion	65.03	66.18
Bra001039.1-P	Field mustard	cytosol, mitochondrion	64.87	66.13
CDX91986	Canola	mitochondrion	64.87	65.6
VIT_19s0014g03120.t01	Wine grape	cytosol	14.4	65.47
GSMUA_Achr1P11640_001	Banana	cytosol	58.23	61.85
HORVU3Hr1G069620.2	Barley	plasma membrane	59.02	59.3
Os01t0733600-01	Rice	cytosol	58.39	58.95
TraesCS3D01G280300.1	Wheat	plastid	59.02	58.83
TraesCS3B01G314200.1	Wheat	cytosol	58.23	58.32
TraesCS3A01G280500.2	Wheat	plastid	58.86	58.03
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	57.91	57.64
KRH46914	Soybean	cytosol, nucleus, peroxisome	31.01	55.84
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	50.0	55.63
TraesCS3B01G100500.1	Wheat	plastid	55.38	54.86
TraesCS1D01G227800.1	Wheat	cytosol, peroxisome, plastid	52.69	54.41
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	53.8	54.05
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	55.06	53.37
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	43.67	52.77
CDY06413	Canola	mitochondrion, nucleus	58.54	37.34
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	26.58	23.83
VIT_18s0001g07630.t01	Wine grape	endoplasmic reticulum	25.79	23.69

Protein Annotations

Gene3D:1.20.990.10	EntrezGene:100259949	wikigene:100259949	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80
MapMan:7.11.3.1.1.2	ProteinID:CBI33663	ProteinID:CBI33663.3	ncoils:Coil	UniProt:D7TT41	InterPro:FAD-binding_1
EMBL:FN596245	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf
GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009987	GO:GO:0010181	GO:GO:0016043	GO:GO:0016226	GO:GO:0016491	GO:GO:0016651
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173
InterPro:IPR029039	EntrezGene:LOC100259949	wikigene:LOC100259949	HAMAP:MF_03178	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:NDOR1
InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369	PRINTS:PR00371
PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218
SUPFAM:SSF52343	SUPFAM:SSF63380	TIGR:TC69284	UniParc:UPI0001BE3C39	ArrayExpress:VIT_14s0006g03070	EnsemblPlantsGene:VIT_14s0006g03070
EnsemblPlants:VIT_14s0006g03070.t01	unigene:Vvi.8970	RefSeq:XP_002280059	RefSeq:XP_002280059.1	RefSeq:XP_003633729	RefSeq:XP_003633729.1
SEG:seg	:	:	:	:	:

Description

NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/TrEMBL;Acc:D7TT41]

Coordinates

chr14:-:21477917..21501677

Molecular Weight (calculated)

71830.7 Da

IEP (calculated)

7.257

GRAVY (calculated)

-0.342

Length

632 amino acids

Sequence
(BLAST)

001: MNGREKQKQK LLILYASQTG NALDAAERIA REAERRGCPV TLLSIDCFNA GSLPYEENVI FVVSTTGQGD TPDSMKAFWK FLLQRNLSQR WLEGVHYAVF
101: GLGDSGYQKY NFVAKKLDKR LLDLGAVAIV ERGLGDDQHP SGYEGALDPW MSSLWNTLSK MNPKFFPNGI DFLIQDAHLI DPPKVQITYH DVDKVHSHFS
201: TDSDLKCIEM QIERVRSMHP GKFSRDKNRP DCFLRMVENH SLTRAGCEKN VLHIEFEVLS SAIEYAVGDI VEVLPSQSPI AIDTFIQRCN LNPESFITVH
301: PREMENHLPN ANINDSKIPI KLKTFVELTM DVASASPRRY FFEARILFFA TAEHEKERLQ YFASPEGRDD LYQYNQRERR TVLEVLEDFP SVQMPFEWLV
401: QLVPPLKKRA YSISSSQLAH PNQLHLTVNV TPWTTPFKRK RTGLCSKWLA GLDPQQGVII PAWFIKGSLP APPPSLPLIL IGPGTGCAPF RGFVEERAIQ
501: SRSGSTAPVL FFFGCWNEDN DFLYRDFWLS HSRNGGVLSE EKGGGFCVAF SRDQPHKVYV QHKMRENSQR IWNLLCEGAS IYVAGSSTKM PSDVFSCFEE
601: IVSKENGVPR ESAVRWLRAL ERAGRYHVEA WS

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.