Factsheet for TraesCS3A01G280500.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G314200.1	Wheat	cytosol	93.45	94.93
TraesCS3D01G280300.1	Wheat	plastid	93.29	94.32
HORVU3Hr1G069620.2	Barley	plasma membrane	87.68	89.35
Os01t0733600-01	Rice	cytosol	74.26	76.04
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	66.77	75.35
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	74.88	73.62
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	72.85	73.54
Zm00001d043539_P001	Maize	cytosol, nucleus, peroxisome, plastid	54.76	67.11
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	64.9	66.14
GSMUA_Achr1P11640_001	Banana	cytosol	61.31	66.05
Bra001039.1-P	Field mustard	cytosol, mitochondrion	58.35	60.32
AT3G02280.2	Thale cress	mitochondrion	58.5	60.19
KRH01775	Soybean	cytosol, mitochondrion	58.19	59.87
CDX74264	Canola	mitochondrion	57.88	59.74
CDX91986	Canola	mitochondrion	58.03	59.52
VIT_14s0006g03070.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	58.03	58.86
Solyc02g085820.2.1	Tomato	cytosol	57.57	58.57
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	57.41	58.41
KRH46914	Soybean	cytosol, nucleus, peroxisome	27.3	49.86
CDY06413	Canola	mitochondrion, nucleus	53.04	34.31
TraesCS2A01G505800.2	Wheat	endoplasmic reticulum	26.99	24.71
TraesCS5A01G361100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	26.99	24.61

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:7.11.3.1.1.2	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173
InterPro:IPR029039	HAMAP:MF_03178	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:NDOR1	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175
PFAM:PF00258	PFAM:PF00667	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384
PANTHER:PTHR19384	PANTHER:PTHR19384:SF10	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380
EnsemblPlantsGene:TraesCS3A01G280500	EnsemblPlants:TraesCS3A01G280500.2	TIGR:cd06207	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:+:509539231..509543740

Molecular Weight (calculated)

71188.0 Da

IEP (calculated)

6.310

GRAVY (calculated)

-0.291

Length

641 amino acids

Sequence
(BLAST)

001: MGPSPSPPQP PPPLPATGRL LVLYASQTGN AMDAAERVGR EAERGGCPAV DVLSMDSFDP SCLPGEMSVV FVVSTTGQGD PPDSMKGFWR YLLKKDLGAR
101: WLEGLRFAVF GLGDSGYQKY NLPAKKIDRR LLQLGAEIII EIGLGDDQHP SGYEGALDPW LLSLWESLNK ANPSLLPRIT DIINPNLNYL GDSKIEVIYY
201: SCNDTPPDSI VSDSVIFSSD SKKLIKRARL MSPALKFHSD GEPQYMLKMV TNQRLTKEDY EKDVRHFELE DPSSGISYQV GDALEILPSQ NPSAVNAFIE
301: RCNLDPDCYI TIRAKGGDEV PNGSLLNGSM GRIKLSTFVA LTMDVASASP RRYFFEIMSH FATAEHEKER LQYFASPEGR DDLYQYNQKE SRTVLEVLED
401: FPSVHMPFEW LVQLTPPLKK RAFSISSSPL VHPNQIHLTV SIVSWLTPFK RTRQGLCSTW LAGLSPNEEN LIPCWVHKGS LPPPKPSIPL VLIGPGTGCA
501: PFRAFVEERA AQSARESTAP ILFFFGCRNE DNDFLYKDFW LKHAQDKGVL SLKEGGGFFV AFSRDQPQKV YVQHKIKEQS ARVWNILCSG AAIYVAGSST
601: KMPADVTAAL EEVIRQKGGE AASGWLRKLE RAGKFNIETW S

Best Arabidopsis Sequence Match ( AT3G02280.3 )
(BLAST)

001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS

Arabidopsis Description

ATR3NADPH-dependent diflavin oxidoreductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.