Factsheet for TraesCS5A01G361100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, peroxisome, plastid, secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G363800.1	Wheat	peroxisome	96.44	96.58
TraesCS5D01G370100.1	Wheat	peroxisome	96.44	96.44
HORVU5Hr1G088920.4	Barley	mitochondrion, peroxisome	96.16	90.13
EER99347	Sorghum	endoplasmic reticulum, peroxisome, plastid	83.78	83.43
Zm00001d021385_P002	Maize	endoplasmic reticulum, peroxisome, plastid	83.78	83.07
Os09t0558900-01	Rice	golgi, peroxisome, plastid	82.5	81.23
GSMUA_AchrUn_...	Banana	plastid	75.25	75.25
GSMUA_Achr11P...	Banana	endoplasmic reticulum	74.11	75.07
GSMUA_Achr1P23470_001	Banana	cytosol, peroxisome, plastid	74.25	74.57
GSMUA_Achr2P04920_001	Banana	endoplasmic reticulum	73.26	74.21
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	72.26	72.06
GSMUA_Achr7P05040_001	Banana	cytosol, endoplasmic reticulum, plastid	72.12	71.91
KRH19026	Soybean	mitochondrion	71.83	71.43
TraesCS2A01G505800.2	Wheat	endoplasmic reticulum	70.41	70.71
KRH02867	Soybean	endoplasmic reticulum	70.98	70.58
CDY28169	Canola	plastid	69.27	69.97
Bra011174.1-P	Field mustard	cytosol, plastid	66.15	69.2
Bra010296.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	69.56	69.17
CDY14183	Canola	cytosol, peroxisome, plastid	68.28	68.97
CDX68634	Canola	plastid	69.7	68.82
PGSC0003DMT400035801	Potato	plastid	69.84	68.67
Solyc07g019460.2.1	Tomato	cytosol	69.7	68.53
CDY51656	Canola	plastid	68.71	68.41
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	68.85	68.36
CDY03543	Canola	plastid	68.85	68.17
Bra024095.1-P	Field mustard	endoplasmic reticulum, plastid	64.58	67.96
AT4G30210.3	Thale cress	plastid	68.85	62.53
CDY34997	Canola	mitochondrion	9.25	29.95
Bra021223.1-P	Field mustard	mitochondrion	8.96	29.58
TraesCS6A01G158200.1	Wheat	cytosol, nucleus, peroxisome	23.33	28.87
TraesCS3A01G280500.2	Wheat	plastid	24.61	26.99
TraesCS1A01G226400.1	Wheat	cytosol, peroxisome, plastid	23.47	26.23
TraesCS3A01G085300.1	Wheat	cytosol, nucleus, peroxisome	22.76	24.54

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	ncoils:Coil
InterPro:FAD-binding_1	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927
InterPro:IPR023173	InterPro:IPR029039	HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R
PFAM:PF00175	PFAM:PF00258	PFAM:PF00667	PIRSF:PIRSF000208	PRINTS:PR00369	PRINTS:PR00371
PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF85	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52218
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G361100	EnsemblPlants:TraesCS5A01G361100.1	TIGR:cd06204
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:562481479..562486290

Molecular Weight (calculated)

77430.3 Da

IEP (calculated)

5.288

GRAVY (calculated)

-0.330

Length

703 amino acids

Sequence
(BLAST)

001: MDSAPGMRDS ALDLLAALLT GRAPAAAQDD GGQNRRLLAL LATSLAVLVG CGVALLFRRS SSAAAPLARQ AAAAKPLAAK KDQEPDPDDG RQRVALFFGT
101: QTGTAEGFAK ALAEEAKARY DKAVFKVLDL DDYAAEDDEY EEKLKKENIA FFFLATYGDG EPTDNAARFY KWFSEGNERG EWLSNLKFGV FALGNRQYEH
201: FNKVGKEVDQ LLAEQGGKRI VPVGLGDDDQ CIEDDFNAWK ELLWPELDKL LRIEDNSSAA QSPYTAAIPQ YRIVLTKPED ATHINKSFSL SNGHVVYDSQ
301: HPCRANVSVR RELHTPASDR SCIHLEFDIA GTSLTYETGD HVGVYAENSI ETVEEAEKLL DYSPDTYFSI YADQEDGTPL FGGSLPPPFP SPCTVRVALA
401: RYADLLNSPK KSVLLALAAH ASDPKEAERL RHLASPAGKK EYSQWIIASQ RSLLEVISEF PSAKPPLGVF FAAIAPRLQP RYYSISSSPR MAPTRIHVTC
501: SLVHGQTPTG RIHKGVCSTW MKNSTPSEES QECSWAPIFV RQSNFKLPAD PTVPIIMVGP GTGLAPFRGF LQERLALKES GVELGCAILF FGCRNRQMDF
601: IYEDELNNFA ESGALSELVV AFSREGPTKE YVQHKMAEKA AELWSIVSQG GYVYVCGDAK GMARDVHRAL HTIVQEQGSL DSSKTESYVK NLQTEGRYLR
701: DVW

Best Arabidopsis Sequence Match ( AT4G30210.3 )
(BLAST)

001: MKNMMNYKLK LCSVSKNSKG VSLSPTPHLT KPPTIHTERD LLLPSSSFFF LLLSSSSYNI YNAMSSSSSS STSMIDLMAA IIKGEPVIVS DPANASAYES
101: VAAELSSMLI ENRQFAMIVT TSIAVLIGCI VMLVWRRSGS GNSKRVEPLK PLVIKPREEE IDDGRKKVTI FFGTQTGTAE GFAKALGEEA KARYEKTRFK
201: IVDLDDYAAD DDEYEEKLKK EDVAFFFLAT YGDGEPTDNA ARFYKWFTEG NDRGEWLKNL KYGVFGLGNR QYEHFNKVAK VVDDILVEQG AQRLVQVGLG
301: DDDQCIEDDF TAWREALWPE LDTILREEGD TAVATPYTAA VLEYRVSIHD SEDAKFNDIN MANGNGYTVF DAQHPYKANV AVKRELHTPE SDRSCIHLEF
401: DIAGSGLTYE TGDHVGVLCD NLSETVDEAL RLLDMSPDTY FSLHAEKEDG TPISSSLPPP FPPCNLRTAL TRYACLLSSP KKSALVALAA HASDPTEAER
501: LKHLASPAGK DEYSKWVVES QRSLLEVMAE FPSAKPPLGV FFAGVAPRLQ PRFYSISSSP KIAETRIHVT CALVYEKMPT GRIHKGVCST WMKNAVPYEK
601: SENCSSAPIF VRQSNFKLPS DSKVPIIMIG PGTGLAPFRG FLQERLALVE SGVELGPSVL FFGCRNRRMD FIYEEELQRF VESGALAELS VAFSREGPTK
701: EYVQHKMMDK ASDIWNMISQ GAYLYVCGDA KGMARDVHRS LHTIAQEQGS MDSTKAEGFV KNLQTSGRYL RDVW

Arabidopsis Description

ATR2P450 reductase 2 [Source:TAIR;Acc:AT4G30210]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.