Factsheet for PGSC0003DMT400035801

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 3
peroxisome 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
ChloroP:	plastid
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g019460.2.1	Tomato	cytosol	96.5	96.5
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	76.08	77.16
KRH02867	Soybean	endoplasmic reticulum	75.1	75.95
KRH19026	Soybean	mitochondrion	74.41	75.25
CDY28169	Canola	plastid	71.89	73.85
CDY14183	Canola	cytosol, peroxisome, plastid	71.47	73.42
CDY03543	Canola	plastid	72.87	73.38
Bra010296.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	72.45	73.27
GSMUA_AchrUn_...	Banana	plastid	72.03	73.26
CDY51656	Canola	plastid	72.31	73.23
Bra011174.1-P	Field mustard	cytosol, plastid	68.81	73.21
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	71.75	72.46
CDX68634	Canola	plastid	72.03	72.33
Bra024095.1-P	Field mustard	endoplasmic reticulum, plastid	67.27	72.01
Os08t0243500-01	Rice	cytosol	65.03	71.43
GSMUA_Achr1P23470_001	Banana	cytosol, peroxisome, plastid	69.79	71.29
Zm00001d051072_P001	Maize	plastid	20.42	71.22
GSMUA_Achr11P...	Banana	endoplasmic reticulum	69.09	71.18
GSMUA_Achr2P04920_001	Banana	endoplasmic reticulum	68.67	70.75
Zm00001d021385_P002	Maize	endoplasmic reticulum, peroxisome, plastid	70.07	70.66
TraesCS5B01G363800.1	Wheat	peroxisome	68.95	70.23
TraesCS5D01G370100.1	Wheat	peroxisome	68.95	70.13
GSMUA_Achr7P05040_001	Banana	cytosol, endoplasmic reticulum, plastid	69.09	70.07
EER99347	Sorghum	endoplasmic reticulum, peroxisome, plastid	69.09	69.97
TraesCS5A01G361100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	68.67	69.84
TraesCS2D01G506600.1	Wheat	endoplasmic reticulum	67.27	69.51
EES11568	Sorghum	plastid	67.41	69.45
TraesCS2B01G534200.1	Wheat	endoplasmic reticulum	67.13	69.36
Os09t0558900-01	Rice	golgi, peroxisome, plastid	69.23	69.33
EES13592	Sorghum	cytosol, peroxisome, plastid	68.39	69.26
Zm00001d026483_P001	Maize	plasma membrane	67.13	69.16
Os04t0653400-01	Rice	plasma membrane	67.13	69.06
TraesCS2A01G505800.2	Wheat	endoplasmic reticulum	67.41	68.86
Zm00001d002024_P002	Maize	endoplasmic reticulum, peroxisome, plastid	67.13	68.28
Zm00001d050218_P001	Maize	plasma membrane	66.57	67.81
Zm00001d024412_P002	Maize	plastid	65.87	67.38
PGSC0003DMT400024163	Potato	endoplasmic reticulum	64.2	66.91
AT4G30210.3	Thale cress	plastid	71.89	66.41
Zm00001d043355_P001	Maize	cytosol	14.96	62.57
Zm00001d028379_P001	Maize	endoplasmic reticulum	15.38	59.78
HORVU6Hr1G074580.1	Barley	cytosol	2.8	54.05
Zm00001d032090_P001	Maize	plastid	14.41	32.29
CDY34997	Canola	mitochondrion	8.67	28.57
Bra021223.1-P	Field mustard	mitochondrion	8.25	27.7
PGSC0003DMT400033003	Potato	cytosol, nucleus, peroxisome	22.8	25.87

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039	UniProt:M1B2U5
HAMAP:MF_03212	InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175	PFAM:PF00258
PFAM:PF00667	EnsemblPlantsGene:PGSC0003DMG400013779	PGSC:PGSC0003DMG400013779	EnsemblPlants:PGSC0003DMT400035801	PIRSF:PIRSF000208	PRINTS:PR00369
PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384	PANTHER:PTHR19384:SF85	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002963166	SEG:seg

Description

NADPH-cytochrome P450 oxidoreductase [Source:PGSC_GENE;Acc:PGSC0003DMG400013779]

Coordinates

chr7:+:13009646..13015364

Molecular Weight (calculated)

79203.8 Da

IEP (calculated)

5.001

GRAVY (calculated)

-0.291

Length

715 amino acids

Sequence
(BLAST)

001: MDSTSEKLSP FDFMAAIFKG GKIFDKLNSS SDSGDSTSPA SLTALLMENK DLMMILTTSV AVLIGCAVVL MWRRSSTSAK KVGELPKLVV PKSVVEPEEI
101: DDGKKKVTIF FGTQTGTAEG FAKALAEEAK ARYEKAVFKV IDMDDYAADD EEYEEKLKKE KLAFFFLATY GDGEPTDNAA RFYKWFEEGK ERGDYFKNLQ
201: YGVFGLGNRQ YEHFNKIAKV VDELLAEQGG QRLVPVGLGD DDQCIEDDFA AWRELLWPEL DKLLLDGDDA TAATPYTAAV LEYRVITYEK SNFDNDLTNT
301: NGHANGHVIV DAQHPVRANV AVRKELHTAA SDRSCTHLEF DISGTGLVYE TGDHVGVYCE NFIETVEEAE RLLNISPDTF FSIHTDKEDG TPLGGSSLPS
401: PFPPCTLRTA LTRYADLLSS PKKSTLLALA ACASDPNEAD RLRYLASPAG KEEYAQWIVA SQRSLLEVMA EFPSAKTSVG VFFASVSPRL QPRFYSISSS
501: PRMATSRIHV TCALVYDKMP TGRIHKGVCS TWMKNAIPLE ESLSCSTAPI FVRQSNFKLP SDNKVPIIMI GPGTGLAPFR GFLQERMALK KEGAELGPAV
601: LFFGCRNRQM DYIYQDELDN FLEAGALSNL VVAFSREGPN KEYVQHKMTQ KADDIWNMIS QGGYVYVCGD AKGMARDVHR TLHTIAQDQG SLDSSKAESF
701: VKNLQTTGRY LRDVW

Best Arabidopsis Sequence Match ( AT4G30210.3 )
(BLAST)

001: MKNMMNYKLK LCSVSKNSKG VSLSPTPHLT KPPTIHTERD LLLPSSSFFF LLLSSSSYNI YNAMSSSSSS STSMIDLMAA IIKGEPVIVS DPANASAYES
101: VAAELSSMLI ENRQFAMIVT TSIAVLIGCI VMLVWRRSGS GNSKRVEPLK PLVIKPREEE IDDGRKKVTI FFGTQTGTAE GFAKALGEEA KARYEKTRFK
201: IVDLDDYAAD DDEYEEKLKK EDVAFFFLAT YGDGEPTDNA ARFYKWFTEG NDRGEWLKNL KYGVFGLGNR QYEHFNKVAK VVDDILVEQG AQRLVQVGLG
301: DDDQCIEDDF TAWREALWPE LDTILREEGD TAVATPYTAA VLEYRVSIHD SEDAKFNDIN MANGNGYTVF DAQHPYKANV AVKRELHTPE SDRSCIHLEF
401: DIAGSGLTYE TGDHVGVLCD NLSETVDEAL RLLDMSPDTY FSLHAEKEDG TPISSSLPPP FPPCNLRTAL TRYACLLSSP KKSALVALAA HASDPTEAER
501: LKHLASPAGK DEYSKWVVES QRSLLEVMAE FPSAKPPLGV FFAGVAPRLQ PRFYSISSSP KIAETRIHVT CALVYEKMPT GRIHKGVCST WMKNAVPYEK
601: SENCSSAPIF VRQSNFKLPS DSKVPIIMIG PGTGLAPFRG FLQERLALVE SGVELGPSVL FFGCRNRRMD FIYEEELQRF VESGALAELS VAFSREGPTK
701: EYVQHKMMDK ASDIWNMISQ GAYLYVCGDA KGMARDVHRS LHTIAQEQGS MDSTKAEGFV KNLQTSGRYL RDVW

Arabidopsis Description

ATR2P450 reductase 2 [Source:TAIR;Acc:AT4G30210]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.