CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050218_P001	Maize	plasma membrane	93.2	93.73
Zm00001d024412_P002	Maize	plastid	90.37	91.27
Os08t0243500-01	Rice	cytosol	80.74	87.56
GSMUA_Achr11P...	Banana	endoplasmic reticulum	73.23	74.5
GSMUA_Achr2P04920_001	Banana	endoplasmic reticulum	73.09	74.35
GSMUA_AchrUn_...	Banana	plastid	73.37	73.68
EER99347	Sorghum	endoplasmic reticulum, peroxisome, plastid	73.65	73.65
GSMUA_Achr1P23470_001	Banana	cytosol, peroxisome, plastid	72.66	73.29
VIT_11s0052g00880.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	72.52	72.62
GSMUA_Achr7P05040_001	Banana	cytosol, endoplasmic reticulum, plastid	72.24	72.34
EES11568	Sorghum	plastid	70.4	71.61
KRH19026	Soybean	mitochondrion	70.11	70.01
CDY28169	Canola	plastid	68.98	69.97
KRH02867	Soybean	endoplasmic reticulum	69.55	69.45
CDY51656	Canola	plastid	69.26	69.26
Bra011174.1-P	Field mustard	cytosol, plastid	65.72	69.05
CDY14183	Canola	cytosol, peroxisome, plastid	67.99	68.97
Bra010296.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	68.98	68.88
CDX72222	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	68.98	68.79
Solyc07g019460.2.1	Tomato	cytosol	69.41	68.53
CDX68634	Canola	plastid	68.98	68.4
PGSC0003DMT400035801	Potato	plastid	69.26	68.39
Bra024095.1-P	Field mustard	endoplasmic reticulum, plastid	64.59	68.26
CDY03543	Canola	plastid	68.56	68.17
AT4G30210.3	Thale cress	plastid	68.27	62.27
CDY34997	Canola	mitochondrion	8.78	28.57
Bra021223.1-P	Field mustard	mitochondrion	8.36	27.7
EES03571	Sorghum	cytosol, nucleus, peroxisome, plastid	24.65	27.4

Protein Annotations

Gene3D:1.20.990.10	Gene3D:2.40.30.10	Gene3D:3.40.50.360	Gene3D:3.40.50.80	MapMan:50.1.6	EntrezGene:8057875
UniProt:C5YJG8	ncoils:Coil	EnsemblPlants:EES13592	ProteinID:EES13592	ProteinID:EES13592.1	InterPro:FAD-binding_1
InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavdoxin-like	InterPro:Flavodoxin/NO_synth	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:Flavoprotein-like_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003958	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	InterPro:IPR008254	InterPro:IPR017927	InterPro:IPR023173	InterPro:IPR029039	HAMAP:MF_03212
InterPro:NADPH_Cyt_P450_Rdtase_alpha	InterPro:OxRdtase_FAD/NAD-bd	InterPro:P450R	PFAM:PF00175	PFAM:PF00258	PFAM:PF00667
PIRSF:PIRSF000208	PRINTS:PR00369	PRINTS:PR00371	PFscan:PS50902	PFscan:PS51384	PANTHER:PTHR19384
PANTHER:PTHR19384:SF85	InterPro:Riboflavin_synthase-like_b-brl	EnsemblPlantsGene:SORBI_3007G088000	SUPFAM:SSF52218	SUPFAM:SSF52343	SUPFAM:SSF63380
unigene:Sbi.20553	TMHMM:TMhelix	UniParc:UPI0001A87C1E	RefSeq:XP_002444097.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:12071780..12077348

Molecular Weight (calculated)

77463.2 Da

IEP (calculated)

5.023

GRAVY (calculated)

-0.307

Length

706 amino acids

Sequence
(BLAST)

001: MDSATTSGAM ELVAALLRGR VPPELMGGDG AEGRALVATL AAAVLGAALF VLWRRAAAGK KRKREAAAAA VAEATEVKAR AAKGGEDEKA ADDGRKKVTV
101: FFGTQTGTAE GFAKALAEEA KARYDKAIFK VVDLDDYAAE DEEYEEKLKK EKLALFFVAT YGDGEPTDNA ARFYKWFTEG NERGVWLNDF EYAVFGLGNR
201: QYEHFNKVAK VVDEILTEQG GKRLVPVGLG DDDQCIEDDF NAWKEALWPE LDRLLRDEND ASTGTTYTAA IPEYRVEFIK PEEAAHLERN FSLANGHAVH
301: DAQHPCQANV AVRRELHTPA SDRSCTHLEF DIAGTGLTYE TGDHVGVYTE NCPEVVEEAE RLLGYSPDTF FTIHADKEDG TPLSGSSLAP PFPSPITVRN
401: ALARYADLLN SPKKTSLVAL ATYASDPAEA DRLRFLASAA GKDEYAQWVV ASQRSLLEVM AEFPSAKPPL GVFFAAVAPR LQPRYYSISS SPSMAATRIH
501: VTCALVHETT PAGRVHKGVC STWIKNAVPS EESKDCSWAP IFVRQSNFKL PADPSVPIIM IGPGTGLAPF RGFLQERLAQ KESGAELGPS VFFFGCRNSK
601: MDFIYEDELN NFLEQGALSE LVLAFSRQGP TKEYVQHKMA QKASEIWDMI SQGAYIYVCG DAKGMARDVH RVLHTIVQEQ GSLDSSKAES FVKNLQMEGR
701: YLRDVW

Best Arabidopsis Sequence Match ( AT4G30210.3 )
(BLAST)

001: MKNMMNYKLK LCSVSKNSKG VSLSPTPHLT KPPTIHTERD LLLPSSSFFF LLLSSSSYNI YNAMSSSSSS STSMIDLMAA IIKGEPVIVS DPANASAYES
101: VAAELSSMLI ENRQFAMIVT TSIAVLIGCI VMLVWRRSGS GNSKRVEPLK PLVIKPREEE IDDGRKKVTI FFGTQTGTAE GFAKALGEEA KARYEKTRFK
201: IVDLDDYAAD DDEYEEKLKK EDVAFFFLAT YGDGEPTDNA ARFYKWFTEG NDRGEWLKNL KYGVFGLGNR QYEHFNKVAK VVDDILVEQG AQRLVQVGLG
301: DDDQCIEDDF TAWREALWPE LDTILREEGD TAVATPYTAA VLEYRVSIHD SEDAKFNDIN MANGNGYTVF DAQHPYKANV AVKRELHTPE SDRSCIHLEF
401: DIAGSGLTYE TGDHVGVLCD NLSETVDEAL RLLDMSPDTY FSLHAEKEDG TPISSSLPPP FPPCNLRTAL TRYACLLSSP KKSALVALAA HASDPTEAER
501: LKHLASPAGK DEYSKWVVES QRSLLEVMAE FPSAKPPLGV FFAGVAPRLQ PRFYSISSSP KIAETRIHVT CALVYEKMPT GRIHKGVCST WMKNAVPYEK
601: SENCSSAPIF VRQSNFKLPS DSKVPIIMIG PGTGLAPFRG FLQERLALVE SGVELGPSVL FFGCRNRRMD FIYEEELQRF VESGALAELS VAFSREGPTK
701: EYVQHKMMDK ASDIWNMISQ GAYLYVCGDA KGMARDVHRS LHTIAQEQGS MDSTKAEGFV KNLQTSGRYL RDVW

Arabidopsis Description

ATR2P450 reductase 2 [Source:TAIR;Acc:AT4G30210]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.