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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • plastid 2
  • endoplasmic reticulum 4
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
 mitochondrion: 25806999
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 25806999 doi
AH Kamal, S Komatsu
National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH19026 Soybean mitochondrion 95.05 95.05
VIT_11s0052g00880.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 80.62 80.85
CDY28169 Canola plastid 74.54 75.72
Solyc07g019460.2.1 Tomato cytosol 76.24 75.38
CDX72222 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 75.39 75.28
Bra010296.1-P Field mustard cytosol, endoplasmic reticulum, plastid 75.25 75.25
PGSC0003DMT400035801 Potato plastid 75.95 75.1
CDY51656 Canola plastid 74.96 75.07
GSMUA_AchrUn_... Banana plastid 74.54 74.96
Bra011174.1-P Field mustard cytosol, plastid 70.86 74.55
Bra024095.1-P Field mustard endoplasmic reticulum, plastid 70.3 74.4
CDX68634 Canola plastid 74.68 74.16
CDY14183 Canola cytosol, peroxisome, plastid 72.84 73.99
CDY03543 Canola plastid 74.12 73.8
GSMUA_Achr2P04920_001 Banana endoplasmic reticulum 71.99 73.34
GSMUA_Achr1P23470_001 Banana cytosol, peroxisome, plastid 72.28 73.0
GSMUA_Achr11P... Banana endoplasmic reticulum 71.29 72.62
Os08t0243500-01 Rice cytosol 66.62 72.35
Zm00001d021385_P002 Maize endoplasmic reticulum, peroxisome, plastid 71.43 71.23
Os04t0653400-01 Rice plasma membrane 69.87 71.08
GSMUA_Achr7P05040_001 Banana cytosol, endoplasmic reticulum, plastid 70.86 71.06
TraesCS5A01G361100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 70.58 70.98
TraesCS5D01G370100.1 Wheat peroxisome 70.58 70.98
EER99347 Sorghum endoplasmic reticulum, peroxisome, plastid 70.86 70.96
TraesCS2B01G534200.1 Wheat endoplasmic reticulum 69.45 70.95
TraesCS5B01G363800.1 Wheat peroxisome 70.3 70.8
Zm00001d051072_P001 Maize plastid 20.51 70.73
TraesCS2D01G506600.1 Wheat endoplasmic reticulum 69.02 70.52
EES11568 Sorghum plastid 69.17 70.46
Os09t0558900-01 Rice golgi, peroxisome, plastid 70.58 69.89
Zm00001d026483_P001 Maize plasma membrane 68.6 69.88
TraesCS2A01G505800.2 Wheat endoplasmic reticulum 69.17 69.86
EES13592 Sorghum cytosol, peroxisome, plastid 69.45 69.55
Zm00001d002024_P002 Maize endoplasmic reticulum, peroxisome, plastid 68.88 69.27
KRH62244 Soybean endoplasmic reticulum 66.9 68.45
AT4G30210.3 Thale cress plastid 74.82 68.35
Zm00001d024412_P002 Maize plastid 67.33 68.1
Zm00001d050218_P001 Maize plasma membrane 67.61 68.09
KRH52957 Soybean endoplasmic reticulum 66.2 67.73
KRH16854 Soybean endoplasmic reticulum 64.78 66.47
Zm00001d043355_P001 Maize cytosol 15.42 63.74
KRH72466 Soybean cytosol, peroxisome, plastid 55.45 63.12
Zm00001d028379_P001 Maize endoplasmic reticulum 15.7 60.33
HORVU6Hr1G074580.1 Barley cytosol 2.97 56.76
Zm00001d032090_P001 Maize plastid 14.43 31.97
CDY34997 Canola mitochondrion 9.34 30.41
Bra021223.1-P Field mustard mitochondrion 9.05 30.05
KRH01775 Soybean cytosol, mitochondrion 25.18 28.57
KRH46914 Soybean cytosol, nucleus, peroxisome 14.14 28.49
Protein Annotations
Gene3D:1.20.990.10EntrezGene:100815844Gene3D:2.40.30.10Gene3D:3.40.50.360Gene3D:3.40.50.80MapMan:50.1.6
UniProt:A0A0R4J5H8EMBL:ACUP02010328InterPro:FAD-binding_1InterPro:Fd_Rdtase_FAD-bdInterPro:Flavdoxin-likeInterPro:Flavodoxin/NO_synth
InterPro:Flavoprot_Pyr_Nucl_cyt_RdtaseInterPro:Flavoprotein-like_sfEnsemblPlantsGene:GLYMA_17G063000GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003958GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0005789GO:GO:0008150GO:GO:0008152GO:GO:0010181GO:GO:0016020
GO:GO:0016021GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114InterPro:IPR008254
InterPro:IPR017927InterPro:IPR023173InterPro:IPR029039EnsemblPlants:KRH02867ProteinID:KRH02867ProteinID:KRH02867.1
HAMAP:MF_03212InterPro:NADPH_Cyt_P450_Rdtase_alphaInterPro:OxRdtase_FAD/NAD-bdInterPro:P450RPFAM:PF00175PFAM:PF00258
PFAM:PF00667PIRSF:PIRSF000208PRINTS:PR00369PRINTS:PR00371PFscan:PS50902PFscan:PS51384
PANTHER:PTHR19384PANTHER:PTHR19384:SF85InterPro:Riboflavin_synthase-like_b-brlSUPFAM:SSF52218SUPFAM:SSF52343SUPFAM:SSF63380
TMHMM:TMhelixUniParc:UPI0001D1DA06SEG:seg:::
Description
hypothetical protein
Coordinates
chr17:+:4855530..4861304
Molecular Weight (calculated)
78598.1 Da
IEP (calculated)
5.290
GRAVY (calculated)
-0.320
Length
707 amino acids
Sequence
(BLAST)
001: MQDSSSMKIS PLDLMSAIFK GKLDPSNVSS STNAAAAAFL LENRDFLMLL TTSVAVLIGC VVVFIWRRSS SPKAKPLEPP KRVVEKLPEI EVDDGTKKVT
101: ILFGTQTGTA EGFAKATAEE AKARYEKATF RVVDMDDYAA DDDEYEERFK KETHVLFFLA TYGDGEPTDN AARFYKWFTE GGEKGEGWLQ NLHYGVFGLG
201: NRQYEHFNKV AKVVDDMLVE QGGKRLVPVG LGDDDQCIED DFTAWKEELW PALDELLRDE DDATVSTPYT AAVLEYRVVI HDPLEASVDE KKWHNVNGHA
301: IVDAQHPVRA NVAVRKELHT PASDRSCTHL EFDISGTGVT YETGDHVGVY CENLSETVEE AIRLIGLSPD TYFSIHTDDE DGKPRSGSSL PPTFPPCTLR
401: TALTRYADVL SSPKKSALLA LAAHASDPSE ADRLRHLASP AGKDEYSEWV IASQRSLLEV MAEFPSAKPP IGVFFAAVAP RLQPRFYSIS SSPRMVPNRI
501: HVTCALVHEK MPTGRIHKGV CSTWMKNSVP LEKSQDCSWA PIFVRTSNFR LPSDNKVPII MIGPGTGLAP FRGFLQERLA LKEGGAELGP SVLFFGCRNR
601: QMDYIYEDEL SHFVNTGALD ELILAFSREG PTKEYVQHKM MEKASEIWSM ISQGAYIYVC GDAKGMARDV HRALHTILQE QGSLDSSKAE SMVKNLQTTG
701: RYLRDVW
Best Arabidopsis Sequence Match ( AT4G30210.3 )
(BLAST)
001: MKNMMNYKLK LCSVSKNSKG VSLSPTPHLT KPPTIHTERD LLLPSSSFFF LLLSSSSYNI YNAMSSSSSS STSMIDLMAA IIKGEPVIVS DPANASAYES
101: VAAELSSMLI ENRQFAMIVT TSIAVLIGCI VMLVWRRSGS GNSKRVEPLK PLVIKPREEE IDDGRKKVTI FFGTQTGTAE GFAKALGEEA KARYEKTRFK
201: IVDLDDYAAD DDEYEEKLKK EDVAFFFLAT YGDGEPTDNA ARFYKWFTEG NDRGEWLKNL KYGVFGLGNR QYEHFNKVAK VVDDILVEQG AQRLVQVGLG
301: DDDQCIEDDF TAWREALWPE LDTILREEGD TAVATPYTAA VLEYRVSIHD SEDAKFNDIN MANGNGYTVF DAQHPYKANV AVKRELHTPE SDRSCIHLEF
401: DIAGSGLTYE TGDHVGVLCD NLSETVDEAL RLLDMSPDTY FSLHAEKEDG TPISSSLPPP FPPCNLRTAL TRYACLLSSP KKSALVALAA HASDPTEAER
501: LKHLASPAGK DEYSKWVVES QRSLLEVMAE FPSAKPPLGV FFAGVAPRLQ PRFYSISSSP KIAETRIHVT CALVYEKMPT GRIHKGVCST WMKNAVPYEK
601: SENCSSAPIF VRQSNFKLPS DSKVPIIMIG PGTGLAPFRG FLQERLALVE SGVELGPSVL FFGCRNRRMD FIYEEELQRF VESGALAELS VAFSREGPTK
701: EYVQHKMMDK ASDIWNMISQ GAYLYVCGDA KGMARDVHRS LHTIAQEQGS MDSTKAEGFV KNLQTSGRYL RDVW
Arabidopsis Description
ATR2P450 reductase 2 [Source:TAIR;Acc:AT4G30210]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.